BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038846
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    97   2e-18
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...    94   1e-17
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...    92   6e-17
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/86 (60%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
 Frame = +2

Query: 2    ADELSERMLEMPSEGKAQNKVCRDARADKKSK--KYSESDWKAMVHRDDGSGTALKTLRR 175
            ADEL+ERM++M SEG  +NK+ R+  A  + K  K+S SDW+ ++HRDDGSG ALK L+R
Sbjct: 791  ADELAERMMDMASEGMVENKITRNESAFNRQKRNKFSGSDWQTIIHRDDGSGLALKALKR 850

Query: 176  VQKGWGQGSISSFQLPKSDYLDDWDG 253
            VQKGWGQGSISS Q  K+D+LD W+G
Sbjct: 851  VQKGWGQGSISSLQPQKNDFLDYWEG 876


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
 Frame = +2

Query: 2    ADELSERMLEMPSEGKAQNKVCRDARAD--KKSKKYSESDWKAMVHRDDGSGTALKTLRR 175
            ADEL+ERM+EM SE   +NK   + +    +   K + +DW  +VHRDDGSG ALK L+R
Sbjct: 787  ADELAERMMEMASESNKENKAYPNVKGHILRNKNKDAGNDWPIIVHRDDGSGIALKALKR 846

Query: 176  VQKGWGQGSISSFQLPKSDYLDDWDG 253
            VQKGWGQGSISS Q  K ++ D WDG
Sbjct: 847  VQKGWGQGSISSLQPQKLEFFDYWDG 872


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2    ADELSERMLEMPSEGKAQNKVCRDARA--DKKSKKYSESDWKAMVHRDDGSGTALKTLRR 175
            A+  +E+M+EM S G+  NKV  +A     KK  KYS ++W+ ++HRDDGSG ALK+L R
Sbjct: 787  ANNFAEKMMEMASVGEVANKVDPNATDIHQKKHNKYSGNNWQNILHRDDGSGIALKSLSR 846

Query: 176  VQKGWGQGSISSFQLPKSDYLDDWD 250
            V+KGWGQG ISSFQ  + DYLD W+
Sbjct: 847  VKKGWGQGDISSFQPQRVDYLDYWE 871


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2    ADELSERMLEMPSEGKAQNKVCRDARA--DKKSKKYSESDWKAMVHRDDGSGTALKTLRR 175
            A+  +++M+EM S G+  NKV  +AR    KK  K   ++W+ ++HRDDGSG AL++L R
Sbjct: 787  ANSFADKMMEMASVGEVANKVDPNARDIHQKKHNKNGGNNWQNILHRDDGSGIALRSLSR 846

Query: 176  VQKGWGQGSISSFQLPKSDYLDDWD 250
            V+KGWGQG ISSFQ P+ DYLD W+
Sbjct: 847  VKKGWGQGDISSFQPPRVDYLDYWE 871


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Glycine max]
          Length = 875

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
 Frame = +2

Query: 2    ADELSERMLEMPSEGKAQNKVCRDARADKKSK--KYSESDWKAMVHRDDGSGTALKTLRR 175
            ADEL++RM+E+  E +  ++   + +     K  K   SDW+ +++RD GSG ALKTL+R
Sbjct: 788  ADELAKRMMELELEDRPVDRTYSNRKRVIPGKLLKDGGSDWQDIINRDAGSGIALKTLKR 847

Query: 176  VQKGWGQGSISSFQLPKSDYLDDWDG 253
            VQKGWGQGSISS Q  ++D+LD +DG
Sbjct: 848  VQKGWGQGSISSLQPQQNDFLDYYDG 873