BLASTX nr result

ID: Bupleurum21_contig00038843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038843
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    58   4e-07
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    57   2e-06

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 58.2 bits (139), Expect(2) = 4e-07
 Identities = 28/82 (34%), Positives = 38/82 (46%)
 Frame = +3

Query: 63  LVTCSFANACWRVSGIPCVTGEFNSFAEWLQQVFHQQKRDVVQYVVMICWMLWKSHNDLV 242
           LV C  A   W  SG+  + G F SF +WL  +F      V    + +CW LW   ND+V
Sbjct: 563 LVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVV 622

Query: 243 WNQHSLEVLEVVESAKSVLNQW 308
           WN       +VV    ++L  W
Sbjct: 623 WNGRIWHSQQVVNGCFTMLESW 644



 Score = 20.4 bits (41), Expect(2) = 4e-07
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 8   VDVNIWCPVCQENAES 55
           VD  + CP+C+   E+
Sbjct: 543 VDTPMCCPICRSELET 558


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 41/86 (47%)
 Frame = +3

Query: 63  LVTCSFANACWRVSGIPCVTGEFNSFAEWLQQVFHQQKRDVVQYVVMICWMLWKSHNDLV 242
           L+ CSF    W +S +        S  +WLQ++F +  +     +  I W LW   N++V
Sbjct: 97  LIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTWHCIAAIVWNLWIHRNEVV 156

Query: 243 WNQHSLEVLEVVESAKSVLNQWRCVQ 320
           WN    +  ++V+ A + L +W   Q
Sbjct: 157 WNSKRKQPRQIVDGAVTYLQRWLIAQ 182


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