BLASTX nr result
ID: Bupleurum21_contig00038843
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00038843 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 58 4e-07 ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c... 57 2e-06 >ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein At1g65750-like [Vitis vinifera] Length = 820 Score = 58.2 bits (139), Expect(2) = 4e-07 Identities = 28/82 (34%), Positives = 38/82 (46%) Frame = +3 Query: 63 LVTCSFANACWRVSGIPCVTGEFNSFAEWLQQVFHQQKRDVVQYVVMICWMLWKSHNDLV 242 LV C A W SG+ + G F SF +WL +F V + +CW LW ND+V Sbjct: 563 LVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVV 622 Query: 243 WNQHSLEVLEVVESAKSVLNQW 308 WN +VV ++L W Sbjct: 623 WNGRIWHSQQVVNGCFTMLESW 644 Score = 20.4 bits (41), Expect(2) = 4e-07 Identities = 6/16 (37%), Positives = 10/16 (62%) Frame = +2 Query: 8 VDVNIWCPVCQENAES 55 VD + CP+C+ E+ Sbjct: 543 VDTPMCCPICRSELET 558 >ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis] gi|223534693|gb|EEF36385.1| hypothetical protein RCOM_0596960 [Ricinus communis] Length = 270 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/86 (27%), Positives = 41/86 (47%) Frame = +3 Query: 63 LVTCSFANACWRVSGIPCVTGEFNSFAEWLQQVFHQQKRDVVQYVVMICWMLWKSHNDLV 242 L+ CSF W +S + S +WLQ++F + + + I W LW N++V Sbjct: 97 LIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTWHCIAAIVWNLWIHRNEVV 156 Query: 243 WNQHSLEVLEVVESAKSVLNQWRCVQ 320 WN + ++V+ A + L +W Q Sbjct: 157 WNSKRKQPRQIVDGAVTYLQRWLIAQ 182