BLASTX nr result
ID: Bupleurum21_contig00038836
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00038836
(420 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260... 83 7e-21
ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|2... 79 2e-20
ref|NP_198918.1| myb family transcription factor [Arabidopsis th... 78 1e-18
ref|XP_003542444.1| PREDICTED: cyclin-D-binding Myb-like transcr... 73 1e-18
ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|2... 76 6e-18
>ref|XP_002282624.1| PREDICTED: uncharacterized protein LOC100260316 [Vitis vinifera]
Length = 686
Score = 82.8 bits (203), Expect(3) = 7e-21
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = -3
Query: 418 SQHIEVFPSSDIINCANKEKENDGLIRGKRFSREEDEIVIKAVEDYIDAHCLGEKGVEMV 239
S H+EVFPSSD +GL++GKRFS EEDE+V KAV YI+ H LGE+G+ M+
Sbjct: 387 SGHVEVFPSSD---------GQEGLVQGKRFSPEEDEMVRKAVLSYIEDHGLGEEGINMI 437
Query: 238 MNCISHSNVRNCWKK 194
+NC SH ++ CWK+
Sbjct: 438 LNCKSHRELKGCWKE 452
Score = 35.4 bits (80), Expect(3) = 7e-21
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = -2
Query: 200 EKIAAAIPNRPYTAVYHRAHILF 132
++IAAA+P RP+ +VY+RAH+LF
Sbjct: 451 KEIAAALPWRPHESVYYRAHVLF 473
Score = 26.9 bits (58), Expect(3) = 7e-21
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -1
Query: 126 RAERHEWTGXXXXXXXXEVRKHGENWKMLAKEFKRH 19
R E+ WT +HG W+MLA +H
Sbjct: 475 RDEKRTWTPEEYELVRRFHEQHGSEWRMLADALGKH 510
>ref|XP_002322249.1| predicted protein [Populus trichocarpa] gi|222869245|gb|EEF06376.1|
predicted protein [Populus trichocarpa]
Length = 538
Score = 79.3 bits (194), Expect(3) = 2e-20
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = -3
Query: 415 QHIEVFPSSDIINCANKEKENDGLIRGKRFSREEDEIVIKAVEDYIDAHCLGEKGVEMVM 236
+ +EVFPSSD + K DGL+RGKRFS EEDE+V +AV +YID H LG +G+ MV+
Sbjct: 232 EDVEVFPSSDGPS-DEKAVGEDGLVRGKRFSHEEDEMVKEAVLNYIDVHGLGAEGLNMVL 290
Query: 235 NCISHSNVRNCWKK 194
NC H + +CWK+
Sbjct: 291 NCKKHPAIVHCWKE 304
Score = 37.0 bits (84), Expect(3) = 2e-20
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2
Query: 200 EKIAAAIPNRPYTAVYHRAHILFSSG 123
++I AA+P RP +VYHRAHILF G
Sbjct: 303 KEIGAALPWRPRQSVYHRAHILFERG 328
Score = 27.3 bits (59), Expect(3) = 2e-20
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -1
Query: 126 RAERHEWTGXXXXXXXXEVRKHGENWKMLAKEFKRH 19
R + WT KHG +WK LA+ +H
Sbjct: 327 RGQNSSWTPEEYELIRKFHEKHGSDWKTLAEALGKH 362
>ref|NP_198918.1| myb family transcription factor [Arabidopsis thaliana]
gi|9759148|dbj|BAB09704.1| unnamed protein product
[Arabidopsis thaliana] gi|41619532|gb|AAS10123.1| MYB
transcription factor [Arabidopsis thaliana]
gi|225879080|dbj|BAH30610.1| hypothetical protein
[Arabidopsis thaliana] gi|332007243|gb|AED94626.1| myb
family transcription factor [Arabidopsis thaliana]
Length = 588
Score = 77.8 bits (190), Expect(3) = 1e-18
Identities = 33/75 (44%), Positives = 52/75 (69%)
Frame = -3
Query: 418 SQHIEVFPSSDIINCANKEKENDGLIRGKRFSREEDEIVIKAVEDYIDAHCLGEKGVEMV 239
S +E FPS D + ++E ++RGKRF++EEDE+V AV +YID H LG++G++MV
Sbjct: 278 SDQVEFFPSDDDEGTEDDDEEEVKVVRGKRFTKEEDEMVKNAVLEYIDNHALGDEGIKMV 337
Query: 238 MNCISHSNVRNCWKK 194
M C ++ ++ CWK+
Sbjct: 338 MECKAYPQLKGCWKE 352
Score = 37.0 bits (84), Expect(3) = 1e-18
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = -2
Query: 200 EKIAAAIPNRPYTAVYHRAHILFSSGLRGM 111
++I +A+P R Y +VYHRAH +F +G +G+
Sbjct: 351 KEITSALPWRTYNSVYHRAHTIFEAGSQGI 380
Score = 23.1 bits (48), Expect(3) = 1e-18
Identities = 9/30 (30%), Positives = 12/30 (40%)
Frame = -1
Query: 108 WTGXXXXXXXXEVRKHGENWKMLAKEFKRH 19
WT + HG +WK LA +H
Sbjct: 381 WTKEDIELVMEFQKTHGNDWKTLADAMGKH 410
>ref|XP_003542444.1| PREDICTED: cyclin-D-binding Myb-like transcription factor 1-like
[Glycine max]
Length = 326
Score = 73.2 bits (178), Expect(3) = 1e-18
Identities = 31/53 (58%), Positives = 44/53 (83%)
Frame = -3
Query: 352 DGLIRGKRFSREEDEIVIKAVEDYIDAHCLGEKGVEMVMNCISHSNVRNCWKK 194
DGLIRGKRF+ EEDE + AV DYI++H LG++G++MV++C SH +R+CWK+
Sbjct: 39 DGLIRGKRFTPEEDEKIKLAVFDYIESHGLGDEGLDMVLHCKSHPEIRDCWKE 91
Score = 38.5 bits (88), Expect(3) = 1e-18
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2
Query: 200 EKIAAAIPNRPYTAVYHRAHILFSSG 123
++I AA+P RPY +VY RAHILF G
Sbjct: 90 KEIGAALPQRPYVSVYTRAHILFERG 115
Score = 26.2 bits (56), Expect(3) = 1e-18
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = -1
Query: 126 RAERHEWTGXXXXXXXXEVRKHGENWKMLAKEFKRH 19
R E +WT +HG +WK +A+ +H
Sbjct: 114 RGEDRKWTPEEYEFLRKVKEQHGSDWKSVAEALGKH 149
>ref|XP_002303776.1| predicted protein [Populus trichocarpa] gi|222841208|gb|EEE78755.1|
predicted protein [Populus trichocarpa]
Length = 697
Score = 75.9 bits (185), Expect(3) = 6e-18
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = -3
Query: 415 QHIEVFPSSDIINCANKEKENDGLIRGKRFSREEDEIVIKAVEDYIDAHCLGEKGVEMVM 236
+ +E+FPSSD + K DG +RGKRFS EEDE+V +AV +YI+ H LG G+ MV+
Sbjct: 391 EDVEIFPSSDGPS-DKKAVGEDGFVRGKRFSLEEDEMVKEAVLNYINVHGLGADGLNMVL 449
Query: 235 NCISHSNVRNCWKK 194
NC H +++CWK+
Sbjct: 450 NCKKHPAIKHCWKE 463
Score = 32.7 bits (73), Expect(3) = 6e-18
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2
Query: 200 EKIAAAIPNRPYTAVYHRAHILF 132
++I AA+P RP +VY+RAHILF
Sbjct: 462 KEIGAALPWRPRESVYYRAHILF 484
Score = 26.6 bits (57), Expect(3) = 6e-18
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -1
Query: 126 RAERHEWTGXXXXXXXXEVRKHGENWKMLAKEFKRH 19
R + WT KHG +WK LA+ +H
Sbjct: 486 RDQNSSWTPEEYDLIRKFHEKHGSDWKTLAEALGKH 521