BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038831
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   145   5e-33
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   124   1e-26
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   123   2e-26
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...   118   8e-25
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...   118   8e-25

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
 Frame = -1

Query: 558 KEWDVEILEDLFHSRDYNLIKGIPLYASHEEDSWYWAHENDGVYSVRSVYRYLQEE--KE 385
           + WD +IL DLF+ RD  LI+ IPL   + EDSWYW  ++ G Y V++ YR LQ +  + 
Sbjct: 364 RRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLGRP 423

Query: 384 ETNMEDNSGFWRKLWNLKIPPKVKIFLWRAIRGCLPTRVQLRGKFVEVPTYCPLCCDSRE 205
           ET+      FW K W LKIP KV+  +W+    C+ T + LR ++V++   C  C    E
Sbjct: 424 ETS------FWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPE 477

Query: 204 TIVHVLLKCPFIQQCFSKAGIWQNLPSHITFASWINSLFTQENREKCTSAVMICWACWRA 25
           T+ HVL  C   ++C+   G   + P+     SWI + F   + + C    ++C + W  
Sbjct: 478 TLFHVLFGCSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQ 537

Query: 24  RNDLVWS 4
           RN  VW+
Sbjct: 538 RNHWVWN 544


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  124 bits (311), Expect = 1e-26
 Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
 Frame = -1

Query: 552 WDVEILEDLFHSRDYNLIKGIPLYASHEEDSWYWAHENDGVYSVRSVYRYLQEEKEETNM 373
           W  + + D F +RD +LI  IPL  S  ED   W+ +  G Y+ RS Y  L+  ++ T +
Sbjct: 438 WREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTAL 497

Query: 372 E----DNSGFWRKLWNLKIPPKVKIFLWRAIRGCLPTRVQLRGKFVEVPTYCPLCCDSRE 205
                D++  W +LW +  PPK+  F WRA R CLPTR  L  + V+ P  CP+C    E
Sbjct: 498 VASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELE 557

Query: 204 TIVHVLLKCPFIQQCFSKAGIWQNLPSHITFASWINSLFTQENREKCTSAVMICWACWRA 25
           T +H L++C   +  + ++G+     +  +F  W+ ++F   +       + +CW  W  
Sbjct: 558 TTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWR 617

Query: 24  RNDLVWS 4
           RND+VW+
Sbjct: 618 RNDVVWN 624


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  123 bits (309), Expect = 2e-26
 Identities = 66/189 (34%), Positives = 93/189 (49%)
 Frame = -1

Query: 570 KTGAKEWDVEILEDLFHSRDYNLIKGIPLYASHEEDSWYWAHENDGVYSVRSVYRYLQEE 391
           K G  +WD EIL DLF  RD NLI  I L  +   D  +W  +  G +SV+ VYR +Q+ 
Sbjct: 113 KPGTCDWDQEILNDLFSERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSVKDVYR-VQQP 171

Query: 390 KEETNMEDNSGFWRKLWNLKIPPKVKIFLWRAIRGCLPTRVQLRGKFVEVPTYCPLCCDS 211
                   N   WR+LW L I  K K+F+WRA+   LP R  L  + V   + CP C   
Sbjct: 172 DFSVLYPSNVVVWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQ 231

Query: 210 RETIVHVLLKCPFIQQCFSKAGIWQNLPSHITFASWINSLFTQENREKCTSAVMICWACW 31
            ETI+H+L+ C    Q +    ++Q L           S+F   +     S V++ W+ W
Sbjct: 232 PETIMHILVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLW 291

Query: 30  RARNDLVWS 4
              ND+VW+
Sbjct: 292 TNMNDVVWN 300


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score =  118 bits (295), Expect = 8e-25
 Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
 Frame = -1

Query: 489 PLYASHEEDSWYWAHENDGVYSVRSVYRYLQEEKEETNMEDNSGFWRKLWNLKIPPKVKI 310
           PL++  + D   W  ENDG YSVRS Y    EE  +T+     G+W  +W LK+PPK+K 
Sbjct: 123 PLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKN 182

Query: 309 FLWRAIRGCLPTRVQLRGKFVEVPTYCPLCCDSRETIVHVLLKCPFIQQCFSKAGIWQNL 130
           F+WR  RG LPTR +LR K V+ P  C  C  + E + H+   C F  Q +  + +W  +
Sbjct: 183 FMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEI 242

Query: 129 PS---HITFASWINSLFTQENREKCTSAVMICWACWRARNDLVWSN 1
                H   AS +     Q    + +   +  W+ W+ RN  VW N
Sbjct: 243 QQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWEN 288


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score =  118 bits (295), Expect = 8e-25
 Identities = 59/166 (35%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
 Frame = -1

Query: 489 PLYASHEEDSWYWAHENDGVYSVRSVYRYLQEEKEETNMEDNSGFWRKLWNLKIPPKVKI 310
           PL++  + D   W  ENDG YSVRS Y    EE  +T+     G+W  +W LK+PPK+K 
Sbjct: 216 PLFSKVQHDRIIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKN 275

Query: 309 FLWRAIRGCLPTRVQLRGKFVEVPTYCPLCCDSRETIVHVLLKCPFIQQCFSKAGIWQNL 130
           F+WR  RG LPTR +LR K V+ P  C  C  + E + H+   C F  Q +  + +W  +
Sbjct: 276 FMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEI 335

Query: 129 PS---HITFASWINSLFTQENREKCTSAVMICWACWRARNDLVWSN 1
                H   AS +     Q    + +   +  W+ W+ RN  VW N
Sbjct: 336 QQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKRRNLKVWEN 381