BLASTX nr result

ID: Bupleurum21_contig00038776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038776
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_004139793.1| PREDICTED: cell differentiation protein RCD1...   160   1e-37
ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1...   160   1e-37
emb|CBI26674.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002278757.1| PREDICTED: cell differentiation protein RCD1...   159   2e-37

>ref|XP_002298844.1| predicted protein [Populus trichocarpa] gi|222846102|gb|EEE83649.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/107 (76%), Positives = 88/107 (82%), Gaps = 2/107 (1%)
 Frame = +2

Query: 2   YICTTAERFFTVVRVLASMVAALAEQPSLRLLKHIIRCYLRLSENSRGCDGLRSCLPVML 181
           YICTTAERFF V RVL +MVAALAEQPS RLLKHIIRCYLRLS+N R CD LRSCLP ML
Sbjct: 217 YICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDML 276

Query: 182 RDATFSQCLREDLTTRRWLQQLLFNIDGPLV--ARQAGVGFEHMMMN 316
           RDATFS CLRED TTRRWLQQLL N+ G  V    QAG GF+HM++N
Sbjct: 277 RDATFSSCLREDPTTRRWLQQLLHNVGGNRVVPGLQAGGGFDHMLVN 323


>ref|XP_004139793.1| PREDICTED: cell differentiation protein RCD1 homolog [Cucumis
           sativus] gi|449517076|ref|XP_004165572.1| PREDICTED:
           cell differentiation protein RCD1 homolog [Cucumis
           sativus]
          Length = 319

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/106 (76%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   YICTTAERFFTVVRVLASMVAALAEQPSLRLLKHIIRCYLRLSENSRGCDGLRSCLPVML 181
           YICTTAERFF V RVL +MVAALAEQPS RLLKHIIRCYLRLS+N + CD LRSCLP ML
Sbjct: 214 YICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDML 273

Query: 182 RDATFSQCLREDLTTRRWLQQLLFNIDGPLV-ARQAGVGFEHMMMN 316
           RDATF+ CLRED TTRRWLQQLL N+    V A QAG GF+HMM+N
Sbjct: 274 RDATFNSCLREDPTTRRWLQQLLHNVGMSRVPALQAGAGFDHMMVN 319


>ref|XP_003532138.1| PREDICTED: cell differentiation protein RCD1 homolog [Glycine max]
          Length = 325

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/105 (78%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   YICTTAERFFTVVRVLASMVAALAEQPSLRLLKHIIRCYLRLSENSRGCDGLRSCLPVML 181
           YICTTAERFF V RVL +MVAALAEQPS RLLKHIIRCYLRLS+N R CD LRSCLP ML
Sbjct: 220 YICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDML 279

Query: 182 RDATFSQCLREDLTTRRWLQQLLFNIDGPLV-ARQAGVGFEHMMM 313
           RDATFS CLRED TTRRWLQQLL N+ G  V A QAG GF+HM++
Sbjct: 280 RDATFSTCLREDPTTRRWLQQLLHNVGGNRVPALQAGGGFDHMIV 324


>emb|CBI26674.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/106 (75%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   YICTTAERFFTVVRVLASMVAALAEQPSLRLLKHIIRCYLRLSENSRGCDGLRSCLPVML 181
           YICTTAERFF V RVL +MVAALAEQ S RLLKHIIRCYLRLS+N R CD LR+CLP ML
Sbjct: 180 YICTTAERFFAVGRVLGNMVAALAEQQSTRLLKHIIRCYLRLSDNPRACDALRNCLPDML 239

Query: 182 RDATFSQCLREDLTTRRWLQQLLFNIDGPLVAR-QAGVGFEHMMMN 316
           +DATFS CLRED TTRRWLQQLL N+ G  VA  QAG GF+HM++N
Sbjct: 240 KDATFSSCLREDPTTRRWLQQLLHNVGGSRVAAFQAGGGFDHMLVN 285


>ref|XP_002278757.1| PREDICTED: cell differentiation protein RCD1 homolog isoform 2
           [Vitis vinifera]
          Length = 319

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/106 (75%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = +2

Query: 2   YICTTAERFFTVVRVLASMVAALAEQPSLRLLKHIIRCYLRLSENSRGCDGLRSCLPVML 181
           YICTTAERFF V RVL +MVAALAEQ S RLLKHIIRCYLRLS+N R CD LR+CLP ML
Sbjct: 214 YICTTAERFFAVGRVLGNMVAALAEQQSTRLLKHIIRCYLRLSDNPRACDALRNCLPDML 273

Query: 182 RDATFSQCLREDLTTRRWLQQLLFNIDGPLVAR-QAGVGFEHMMMN 316
           +DATFS CLRED TTRRWLQQLL N+ G  VA  QAG GF+HM++N
Sbjct: 274 KDATFSSCLREDPTTRRWLQQLLHNVGGSRVAAFQAGGGFDHMLVN 319


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