BLASTX nr result

ID: Bupleurum21_contig00038764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038764
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF99297.1| transposon protein, putative, CACTA, En/Spm sub-c...    58   7e-07
gb|AAO37996.1| transposon protein, putative, CACTA, En/Spm sub-c...    58   7e-07
emb|CAD39699.3| OSJNBb0115I21.9 [Oryza sativa Japonica Group]          58   9e-07
gb|ABB47521.1| transposon protein, putative, CACTA, En/Spm sub-c...    57   1e-06
gb|AAP12962.1| hypothetical protein [Oryza sativa Japonica Group...    57   1e-06

>gb|ABF99297.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 859

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  VEKPTTCSLCVINSDHGRMIVASGTVFPSICQGTTLVHCERMTSDNVKVSVDDVLAEFQL 194
           + +PT+C+L V       ++ A G  +    +  T VH  ++ +D  KV VD V  E++L
Sbjct: 384 ITEPTSCTLTVRVMPTFTVLAAEGLAYKPTPE--TRVHGAQLRADCAKVQVDSVKPEYEL 441

Query: 195 IPLPVPSKEHV-TVGDAMGSFVQWPKKLV 278
            PL  P  + V ++G+A G+F+QWPK L+
Sbjct: 442 FPLKYPPNDEVLSLGNARGTFIQWPKDLI 470


>gb|AAO37996.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 866

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  VEKPTTCSLCVINSDHGRMIVASGTVFPSICQGTTLVHCERMTSDNVKVSVDDVLAEFQL 194
           + +PT+C+L V       ++ A G  +    +  T VH  ++ +D  KV VD V  E++L
Sbjct: 391 ITEPTSCTLTVRVMPTFTVLAAEGLAYKPTPE--TRVHGAQLRADCAKVQVDSVKPEYEL 448

Query: 195 IPLPVPSKEHV-TVGDAMGSFVQWPKKLV 278
            PL  P  + V ++G+A G+F+QWPK L+
Sbjct: 449 FPLKYPPNDEVLSLGNARGTFIQWPKDLI 477


>emb|CAD39699.3| OSJNBb0115I21.9 [Oryza sativa Japonica Group]
          Length = 913

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  VEKPTTCSLCVINSDHGRMIVASGTVFPSICQGTTLVHCERMTSDNVKVSVDDVLAEFQL 194
           + +PT+C+L V       +  A G  + S  +  T VH  ++  D  KV VD V  E++L
Sbjct: 473 ITEPTSCTLTVRVMPTFTVPAAEGLAYKSTPE--TRVHGAQLRGDCAKVQVDSVKPEYEL 530

Query: 195 IPLPVPSKEHV-TVGDAMGSFVQWPKKLV 278
            PL  P  + V ++G+A G+F+QWPK L+
Sbjct: 531 FPLKYPPNDEVLSLGNARGTFIQWPKDLI 559


>gb|ABB47521.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 774

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +3

Query: 15  VEKPTTCSLCVINSDHGRMIVASGTVFPSICQGTTLVHCERMTSDNVKVSVDDVLAEFQL 194
           + +PT+C+L V       +  A G  +    +  T VH  ++ SD  KV VD V  E++L
Sbjct: 391 ITEPTSCTLTVRVMPTFTVPAAEGLAYKPTPE--TRVHGAQLRSDCAKVQVDSVKLEYEL 448

Query: 195 IPLPVPSKEHV-TVGDAMGSFVQWPKKLV 278
            PL  P  + V ++G+A G+F+QWPK L+
Sbjct: 449 FPLKYPPNDEVLSLGNARGTFIQWPKDLI 477


>gb|AAP12962.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|41393224|gb|AAS01947.1| putative transposon protein
           [Oryza sativa Japonica Group]
          Length = 599

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +3

Query: 12  DVEKPTTCSLCVINSDHGRMIVASGTVFPSICQGTTLVHCERMTSDNVKVSVDDVLAEFQ 191
           ++EKPT+ +L V       +  A G  +    +  T VH  ++ +D VKV VD V  E++
Sbjct: 361 ELEKPTSYTLTVRVMPTFTVPAAEGLAYKPTPE--TRVHGAQLRADCVKVQVDSVKPEYE 418

Query: 192 LIPLPVPSKEHV-TVGDAMGSFVQWPKKLV 278
           L PL  P  + V ++G+A G+F+QWPK L+
Sbjct: 419 LFPLKYPPNDEVLSLGNARGTFIQWPKDLI 448


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