BLASTX nr result

ID: Bupleurum21_contig00038726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038726
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522610.1| PREDICTED: putative clathrin assembly protei...   108   3e-22
ref|XP_002324864.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_003541475.1| PREDICTED: putative clathrin assembly protei...   106   2e-21
ref|XP_003526396.1| PREDICTED: putative clathrin assembly protei...   105   3e-21
ref|XP_002285168.1| PREDICTED: putative clathrin assembly protei...   105   3e-21

>ref|XP_003522610.1| PREDICTED: putative clathrin assembly protein At2g25430-like
           [Glycine max]
          Length = 652

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 27/145 (18%)
 Frame = +3

Query: 3   NMEYEDCLKSCDTYIGAVKMIDECVGFYSWCKDTRVVWFSDYPEIQEIANKLMEKLEEFL 182
           +M+Y DC+K+ D Y  A K IDE V FY+WCKDT V   S+YPE+Q I NKL+E LEEF+
Sbjct: 304 DMDYADCVKAFDAYSSAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITNKLLETLEEFV 363

Query: 183 RKMSTKPNSNEETREVNTTDMKEEMPQTQ---------------------------HIID 281
           R  + +P S E   EV   +  EE P                               + +
Sbjct: 364 RDRAKRPKSPERKEEVPPVEKVEEEPAPDMNEIKALPPPENYIPPPPPEPEPKPQPQVTE 423

Query: 282 DLMNLKDEGIPAEVQSNKLTLTLFS 356
           DL+NL+D+ + A+ Q NKL L LF+
Sbjct: 424 DLVNLRDDAVTADDQGNKLALALFA 448


>ref|XP_002324864.1| predicted protein [Populus trichocarpa] gi|222866298|gb|EEF03429.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 27/145 (18%)
 Frame = +3

Query: 3   NMEYEDCLKSCDTYIGAVKMIDECVGFYSWCKDTRVVWFSDYPEIQEIANKLMEKLEEFL 182
           +MEY DC+K+ D Y  A K IDE + FY+WCKDT V   S+YPE+Q I  KL+E LEEF+
Sbjct: 322 DMEYPDCVKAFDAYASAAKQIDELIAFYNWCKDTGVARSSEYPEVQRITGKLLETLEEFV 381

Query: 183 RKMSTKPNSNEETREVNTTDMKEE---------------------------MPQTQHIID 281
           R  + +P S E   E      +EE                            PQ   + +
Sbjct: 382 RDRAKRPKSPERKEEAPPVPQEEEPVPDMNEIKALPAPEDFTPPPPPETEPRPQKPQVTE 441

Query: 282 DLMNLKDEGIPAEVQSNKLTLTLFS 356
           DL+NL+D+ + A+ Q N+L L LF+
Sbjct: 442 DLVNLRDDAVTADDQGNRLALALFA 466


>ref|XP_003541475.1| PREDICTED: putative clathrin assembly protein At2g25430-like
           [Glycine max]
          Length = 612

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 33/150 (22%)
 Frame = +3

Query: 6   MEYEDCLKSCDTYIGAVKMIDECVGFYSWCKDTRVVWFSDYPEIQEIANKLMEKLEEFLR 185
           MEYE C+K+ D+Y+ A KM+DE VGFY WCKDT +   S+YP++Q I +KL+  LE FL+
Sbjct: 256 MEYEHCVKAFDSYVSAAKMMDELVGFYGWCKDTGIARSSEYPDVQRITDKLLGTLEGFLK 315

Query: 186 KMSTKPNSNEETREVNTT--------DMKEEM-------------------------PQT 266
           +MS +P S E   EV  T        DM +                           P +
Sbjct: 316 EMSCRPKSPERKLEVKVTVNESQPEADMNKVKALPAPETESFTPPPPMSVAQPNKIAPNS 375

Query: 267 QHIIDDLMNLKDEGIPAEVQSNKLTLTLFS 356
           Q    DL++L+++G+ A+ Q NKL L LFS
Sbjct: 376 QKQTSDLVDLREDGVSADEQGNKLALALFS 405


>ref|XP_003526396.1| PREDICTED: putative clathrin assembly protein At2g25430-like
           isoform 1 [Glycine max] gi|356515418|ref|XP_003526397.1|
           PREDICTED: putative clathrin assembly protein
           At2g25430-like isoform 2 [Glycine max]
          Length = 641

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 27/145 (18%)
 Frame = +3

Query: 3   NMEYEDCLKSCDTYIGAVKMIDECVGFYSWCKDTRVVWFSDYPEIQEIANKLMEKLEEFL 182
           +MEY DC+K+ D Y  A K IDE V FY+WCKDT V   S+YPE+Q+I +KL+E LEEF+
Sbjct: 295 DMEYADCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQKITSKLLETLEEFV 354

Query: 183 RKMSTKPNSNEETREVNTTDMKEEMPQTQ---------------------------HIID 281
           R  + +P S E   E    +  EE P                               + +
Sbjct: 355 RDRAKRPKSPERKEEAPPVEKVEEEPAPDMNEIKALPPPENYTPPPPPEPEPKPQPQVTE 414

Query: 282 DLMNLKDEGIPAEVQSNKLTLTLFS 356
           DL+NL+D+ + A+ Q NK  L LF+
Sbjct: 415 DLVNLRDDAVTADDQGNKFALALFA 439


>ref|XP_002285168.1| PREDICTED: putative clathrin assembly protein At2g25430-like [Vitis
           vinifera]
          Length = 652

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/146 (38%), Positives = 74/146 (50%), Gaps = 29/146 (19%)
 Frame = +3

Query: 6   MEYEDCLKSCDTYIGAVKMIDECVGFYSWCKDTRVVWFSDYPEIQEIANKLMEKLEEFLR 185
           MEY DC+K+ D Y    K IDE V FY+WCKDT V   S+YPE+Q I +KL+E LEEF+R
Sbjct: 303 MEYPDCVKAFDAYASTAKQIDELVAFYNWCKDTGVARSSEYPEVQRITDKLLETLEEFVR 362

Query: 186 KMSTKPNSNEETREVNTTDMKEE-----------------------------MPQTQHII 278
             +  P S E   E      +EE                              PQ   + 
Sbjct: 363 DRAKGPKSPERNEEPQPVAREEEPVPDMNEIKALPPPENYTPPPPPPPEPEPKPQQPQVT 422

Query: 279 DDLMNLKDEGIPAEVQSNKLTLTLFS 356
           +DL+NL+DEG+ A+ Q N+  L LF+
Sbjct: 423 EDLVNLRDEGVTADDQGNRFALALFA 448