BLASTX nr result

ID: Bupleurum21_contig00038724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038724
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   169   2e-40
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   169   2e-40
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   166   2e-39
emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]        149   3e-34
gb|ABA95283.1| retrotransposon protein, putative, unclassified, ...   148   5e-34

>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  169 bits (429), Expect = 2e-40
 Identities = 77/128 (60%), Positives = 101/128 (78%)
 Frame = +1

Query: 1    LKQTGYAKKLISKAGMKGCNPTKYPMDPKELIDKDEGGKAVDVTEYKSMIGGLRYLVHTR 180
            +KQ  YAKK++S+ GM+GCNPT  PM+P+ L+ KD  G  +D TEY+ +IG LRYL+HTR
Sbjct: 1158 IKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTR 1217

Query: 181  PDIAYSVGIASRFMECPTVMHRNAVKRILRYVQGTLQFGLVYTKDSGNNVLTGFSDSDLA 360
            PD++Y+VG+ASRFME PT MH  AVK ILRY++GTL  GLV+   SG+  +TGF+DSDLA
Sbjct: 1218 PDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLA 1277

Query: 361  GSLDDRRT 384
            G +DDRR+
Sbjct: 1278 GDMDDRRS 1285


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  169 bits (429), Expect = 2e-40
 Identities = 77/128 (60%), Positives = 101/128 (78%)
 Frame = +1

Query: 1    LKQTGYAKKLISKAGMKGCNPTKYPMDPKELIDKDEGGKAVDVTEYKSMIGGLRYLVHTR 180
            +KQ  YAKK++S+ GM+GCNPT  PM+P+ L+ KD  G  +D TEY+ +IG LRYL+HTR
Sbjct: 1158 IKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTR 1217

Query: 181  PDIAYSVGIASRFMECPTVMHRNAVKRILRYVQGTLQFGLVYTKDSGNNVLTGFSDSDLA 360
            PD++Y+VG+ASRFME PT MH  AVK ILRY++GTL  GLV+   SG+  +TGF+DSDLA
Sbjct: 1218 PDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITGFTDSDLA 1277

Query: 361  GSLDDRRT 384
            G +DDRR+
Sbjct: 1278 GDMDDRRS 1285


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/128 (60%), Positives = 99/128 (77%)
 Frame = +1

Query: 1    LKQTGYAKKLISKAGMKGCNPTKYPMDPKELIDKDEGGKAVDVTEYKSMIGGLRYLVHTR 180
            LKQT YAKKL+S+ GM  CN    P+DP+  + KD  G  VD TEY+ +IG LRYL+HTR
Sbjct: 1140 LKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGSLRYLLHTR 1199

Query: 181  PDIAYSVGIASRFMECPTVMHRNAVKRILRYVQGTLQFGLVYTKDSGNNVLTGFSDSDLA 360
            PD++Y+VG+ASRFME PTVMH  AVK+ILRY++GT+ +GLVY   +G   +TG++DSDLA
Sbjct: 1200 PDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLA 1259

Query: 361  GSLDDRRT 384
            G LDDRR+
Sbjct: 1260 GDLDDRRS 1267


>emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa Japonica Group]
          Length = 1425

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/129 (55%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1    LKQTGYAKKLISKAGMKGCNPTKYPMDPKELIDKDEGGKAVDVTEYKSMIGGLRYLVHTR 180
            L Q+ YA K++ K GM+GCNPT+ PM+ +  + K+  G+ VD TEY+S++G LRYLV+TR
Sbjct: 1157 LSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSIVGSLRYLVNTR 1216

Query: 181  PDIAYSVGIASRFMECPTVMHRNAVKRILRYVQGTLQFGLVYTKDS-GNNVLTGFSDSDL 357
            PD+AYSVG  SRFME PT  H  AVK ILRY+ GT++ G  Y ++  GN  L GFSDSD+
Sbjct: 1217 PDLAYSVGYVSRFMEKPTSEHWAAVKHILRYISGTIKTGCWYGREEVGNAKLVGFSDSDM 1276

Query: 358  AGSLDDRRT 384
            AG LDDR++
Sbjct: 1277 AGDLDDRKS 1285


>gb|ABA95283.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|215767919|dbj|BAH00148.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 1369

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/128 (54%), Positives = 91/128 (71%)
 Frame = +1

Query: 1    LKQTGYAKKLISKAGMKGCNPTKYPMDPKELIDKDEGGKAVDVTEYKSMIGGLRYLVHTR 180
            LKQ  YA +++ KAG+ GCNP   PM+P+  + K+  G  VD TEY+S++G LRYLV+TR
Sbjct: 1106 LKQAAYASRIVEKAGLTGCNPCATPMEPRLKLSKESAGSLVDATEYRSLVGSLRYLVNTR 1165

Query: 181  PDIAYSVGIASRFMECPTVMHRNAVKRILRYVQGTLQFGLVYTKDSGNNVLTGFSDSDLA 360
            PD+AYSVG  SRFME PT  H  AVKRI+RYV GT+  G  Y K+ G   L G+SDSD+A
Sbjct: 1166 PDLAYSVGYVSRFMEKPTDEHLAAVKRIIRYVAGTIHLGCRYVKE-GEGGLQGYSDSDMA 1224

Query: 361  GSLDDRRT 384
            G +D R++
Sbjct: 1225 GDIDTRKS 1232


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