BLASTX nr result

ID: Bupleurum21_contig00038714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038714
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   120   1e-25
emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   120   1e-25
ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002528361.1| conserved hypothetical protein [Ricinus comm...   104   9e-21

>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
           gi|296083723|emb|CBI23712.3| unnamed protein product
           [Vitis vinifera]
          Length = 642

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/102 (56%), Positives = 75/102 (73%), Gaps = 8/102 (7%)
 Frame = -2

Query: 425 NRGPSSLIDRWISGGKCDCSGWDMGCTLTLFKTK--------HTEPLSQAKAFDIFAKGS 270
           N GPSSLI+RW SGG CDC GWD+GC LT+ KT+        HT+   + K+FD+FA+GS
Sbjct: 533 NGGPSSLIERWRSGGHCDCGGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGS 592

Query: 269 KTDSPTLKMINVGDDLYRITFQSTLSALQSFSIAVTILHTRT 144
           +  +P L+++NV D LY I F+S LSALQSFSIAV I+HTR+
Sbjct: 593 ELSAPILRVVNVHDGLYFIHFRSMLSALQSFSIAVAIIHTRS 634


>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/102 (56%), Positives = 75/102 (73%), Gaps = 8/102 (7%)
 Frame = -2

Query: 425 NRGPSSLIDRWISGGKCDCSGWDMGCTLTLFKTK--------HTEPLSQAKAFDIFAKGS 270
           N GPSSLI+RW SGG CDC GWD+GC LT+ KT+        HT+   + K+FD+FA+GS
Sbjct: 488 NGGPSSLIERWRSGGHCDCGGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGS 547

Query: 269 KTDSPTLKMINVGDDLYRITFQSTLSALQSFSIAVTILHTRT 144
           +  +P L+++NV D LY I F+S LSALQSFSIAV I+HTR+
Sbjct: 548 ELSAPILRVVNVHDGLYFIHFRSMLSALQSFSIAVAIIHTRS 589


>ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|222852420|gb|EEE89967.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/101 (58%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
 Frame = -2

Query: 425 NRGPSSLIDRWISGGKCDCSGWDMGCTLTLFKTK--HTEPLSQA------KAFDIFAKGS 270
           N GPSSLIDRWISGG CDC GWD+GC LT+ K++  H E  SQA      K  D+F +GS
Sbjct: 495 NGGPSSLIDRWISGGHCDCGGWDLGCPLTVLKSRSAHKEFSSQADTQGECKLVDLFIEGS 554

Query: 269 KTDSPTLKMINVGDDLYRITFQSTLSALQSFSIAVTILHTR 147
           +  +P + M+NV D LY + FQSTLSALQSFSIAV  +HT+
Sbjct: 555 ENGAPPMSMVNVHDGLYFVHFQSTLSALQSFSIAVAFIHTQ 595


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 8/101 (7%)
 Frame = -2

Query: 425 NRGPSSLIDRWISGGKCDCSGWDMGCTLTLFKTK--------HTEPLSQAKAFDIFAKGS 270
           N GPSSLIDRW SGG CDC GWD+GC LT+ K++          +   + K  ++F +GS
Sbjct: 503 NGGPSSLIDRWRSGGYCDCGGWDLGCPLTVLKSRSANKEFSSSADMQGECKLINLFIQGS 562

Query: 269 KTDSPTLKMINVGDDLYRITFQSTLSALQSFSIAVTILHTR 147
           +  +P L+M+NV D +Y + FQSTLSALQ+FSIA+  +H++
Sbjct: 563 ENGAPPLRMVNVHDGMYSVHFQSTLSALQTFSIALAFIHSQ 603


>ref|XP_002528361.1| conserved hypothetical protein [Ricinus communis]
           gi|223532229|gb|EEF34033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 637

 Score =  104 bits (259), Expect = 9e-21
 Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 8/102 (7%)
 Frame = -2

Query: 425 NRGPSSLIDRWISGGKCDCSGWDMGCTLTLFKTK--------HTEPLSQAKAFDIFAKGS 270
           N GPS L +RW SGG CDC GWD+GC LT+ K++          +   + K  D+  +GS
Sbjct: 526 NGGPSGLTERWKSGGCCDCGGWDLGCPLTVLKSRLSNKELSPQADMQGECKLIDLITQGS 585

Query: 269 KTDSPTLKMINVGDDLYRITFQSTLSALQSFSIAVTILHTRT 144
           +  +P ++M+NV D LY + FQSTLSALQSFSIAV  +H+++
Sbjct: 586 ENSAPQMRMVNVHDGLYFVHFQSTLSALQSFSIAVAFIHSQS 627


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