BLASTX nr result

ID: Bupleurum21_contig00038700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038700
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]    69   5e-10
ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...    66   3e-09
emb|CBI20806.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_003588626.1| U-box domain-containing protein [Medicago tr...    56   3e-06
ref|XP_002880578.1| kinase [Arabidopsis lyrata subsp. lyrata] gi...    55   8e-06

>emb|CAN69465.1| hypothetical protein VITISV_023046 [Vitis vinifera]
          Length = 768

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/57 (59%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
 Frame = -1

Query: 357 PDFCTIYVISKGKIASTRAASRTAPVSSALRSQMQYQPSIRSEP-EVTIPNSYGSKG 190
           PDFCT+YVISKGKI+STR+ASR AP  S LR+Q+  Q SIR +P ++ IP++  S+G
Sbjct: 146 PDFCTVYVISKGKISSTRSASRAAPAISPLRNQIMNQGSIRPDPSDLPIPHAPSSRG 202


>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/56 (58%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -1

Query: 357 PDFCTIYVISKGKIASTRAASRTAPVSSALRSQMQYQPSIRSEP-EVTIPNSYGSK 193
           PDFCT+YVISKGKI+STR+ASR AP  S LR+Q+  Q SIR +P ++ IP++  S+
Sbjct: 146 PDFCTVYVISKGKISSTRSASRAAPAISPLRNQIMNQGSIRPDPSDLPIPHAPSSR 201


>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/56 (58%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = -1

Query: 357 PDFCTIYVISKGKIASTRAASRTAPVSSALRSQMQYQPSIRSEP-EVTIPNSYGSK 193
           PDFCT+YVISKGKI+STR+ASR AP  S LR+Q+  Q SIR +P ++ IP++  S+
Sbjct: 559 PDFCTVYVISKGKISSTRSASRAAPAISPLRNQIMNQGSIRPDPSDLPIPHAPSSR 614


>ref|XP_003588626.1| U-box domain-containing protein [Medicago truncatula]
           gi|355477674|gb|AES58877.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 786

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -1

Query: 357 PDFCTIYVISKGKIASTRAASRTAPVSSALRSQMQYQPSIRSEPEVTIP 211
           PDFCT+YV+ KGKI S R+ASR AP  S L+SQ+ +      +PE  +P
Sbjct: 171 PDFCTVYVVGKGKIQSMRSASRAAPSFSPLQSQLSHSSPKSEQPEPRVP 219


>ref|XP_002880578.1| kinase [Arabidopsis lyrata subsp. lyrata]
           gi|297326417|gb|EFH56837.1| kinase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 788

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/54 (48%), Positives = 42/54 (77%)
 Frame = -1

Query: 357 PDFCTIYVISKGKIASTRAASRTAPVSSALRSQMQYQPSIRSEPEVTIPNSYGS 196
           PDFCT+Y+ISKGKI + R+ASR+AP+++ LRS +Q  PS++  P   +P+++ +
Sbjct: 160 PDFCTVYIISKGKIQTMRSASRSAPMTAPLRSPVQ-PPSLK--PPQPMPSTFAN 210


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