BLASTX nr result

ID: Bupleurum21_contig00038698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038698
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   104   8e-21
emb|CBI19956.3| unnamed protein product [Vitis vinifera]              104   8e-21
gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indi...    97   1e-18
dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protei...    97   1e-18
ref|NP_001067859.1| Os11g0460700 [Oryza sativa Japonica Group] g...    94   9e-18

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = -2

Query: 335 WGALLGACRIHSDMDMADLVLEEIHSSDSGACPTDDSHYVLLSNISAASERWENAERMRR 156
           WGALLGACR+H DM+MAD V+EEI   DS      DSHYVLLSNI AAS+RWE AE+MR 
Sbjct: 492 WGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRM 551

Query: 155 IVSSKGFQKTPGSSSLM 105
            +++KGFQKT G SS+M
Sbjct: 552 EMANKGFQKTSGCSSIM 568


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = -2

Query: 335 WGALLGACRIHSDMDMADLVLEEIHSSDSGACPTDDSHYVLLSNISAASERWENAERMRR 156
           WGALLGACR+H DM+MAD V+EEI   DS      DSHYVLLSNI AAS+RWE AE+MR 
Sbjct: 363 WGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRM 422

Query: 155 IVSSKGFQKTPGSSSLM 105
            +++KGFQKT G SS+M
Sbjct: 423 EMANKGFQKTSGCSSIM 439


>gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indica Group]
          Length = 548

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = -2

Query: 335 WGALLGACRIHSDMDMADLVLEEIHSSDSGACPTDDSHYVLLSNISAASERWENAERMRR 156
           WG+LLGACR+H D +M++LV  EIH   S    T+D+ Y+LLSNI A+SERWE AERMRR
Sbjct: 453 WGSLLGACRVHGDAEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWEQAERMRR 512

Query: 155 IVSSKGFQKTPGSSSLMLE 99
            ++  G  KTPG SS+ LE
Sbjct: 513 KMALHGVGKTPGCSSVELE 531


>dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|125572862|gb|EAZ14377.1|
           hypothetical protein OsJ_04297 [Oryza sativa Japonica
           Group] gi|215697551|dbj|BAG91545.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 548

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = -2

Query: 335 WGALLGACRIHSDMDMADLVLEEIHSSDSGACPTDDSHYVLLSNISAASERWENAERMRR 156
           WG+LLGACR+H D +M++LV  EIH   S    T+D+ Y+LLSNI A+SERWE AERMRR
Sbjct: 453 WGSLLGACRVHGDAEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWEQAERMRR 512

Query: 155 IVSSKGFQKTPGSSSLMLE 99
            ++  G  KTPG SS+ LE
Sbjct: 513 KMALHGVGKTPGCSSVELE 531


>ref|NP_001067859.1| Os11g0460700 [Oryza sativa Japonica Group]
           gi|113645081|dbj|BAF28222.1| Os11g0460700, partial
           [Oryza sativa Japonica Group]
          Length = 191

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = -2

Query: 335 WGALLGACRIHSDMDMADLVLEEIHSSDSGACPTDDSHYVLLSNISAASERWENAERMRR 156
           W +LLGACR+H D +M++LV  EIH   S    T+D+ Y+LLSNI A+SERWE AERMRR
Sbjct: 90  WCSLLGACRVHGDAEMSELVSSEIHQLHSCRVSTNDAEYILLSNIMASSERWEQAERMRR 149

Query: 155 IVSSKGFQKTPGSSSLMLEPLDQIFRTAAHAI 60
            ++  G  KTPG SS+ L+  +Q  R  +  I
Sbjct: 150 KMALHGVGKTPGCSSVELDVPEQQVRAGSENI 181


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