BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038685
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002526186.1| pentatricopeptide repeat-containing protein,...   122   2e-26
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   115   3e-24
ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24

>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
           gi|297738773|emb|CBI28018.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/107 (58%), Positives = 82/107 (76%)
 Frame = -3

Query: 326 ARHLFDSMSRRDVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCA 147
           AR LFD MSRRDVF++NAMLS Y K G V+D++  F+QM   D+VS+NTVI+G + NGC+
Sbjct: 77  ARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCS 136

Query: 146 KDALKVVGRMGKEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIVA 6
             AL+   RM +EG   TDYT VS L+ACS++LD+K GK+IHG+IVA
Sbjct: 137 SQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVA 183



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/95 (32%), Positives = 54/95 (56%)
 Frame = -3

Query: 293 DVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCAKDALKVVGRMG 114
           D  T + +LS Y + G +D+    F ++  +D V + T++ G A NG  +DAL +   M 
Sbjct: 255 DQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREML 314

Query: 113 KEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIV 9
            E V   ++T+ S +++C+R+  L  G+ +HGK V
Sbjct: 315 LENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349


>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
           predicted protein [Populus trichocarpa]
          Length = 695

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/108 (58%), Positives = 81/108 (75%)
 Frame = -3

Query: 326 ARHLFDSMSRRDVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCA 147
           AR LFD M++RD F++NAMLS Y K G V+D++  F+ MP RDSVS+NTVISG A NG  
Sbjct: 77  ARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRG 136

Query: 146 KDALKVVGRMGKEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIVAC 3
             AL V  RM KEG+  T+YT VS LNAC+++LDL+ GK+IHG+I+ C
Sbjct: 137 GPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIIC 184



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 35/139 (25%)
 Frame = -3

Query: 326 ARHLFDSMSRRDVFTYNAMLSGYCK----------------------------------- 252
           AR LFD M  R+V T+N M+SGY K                                   
Sbjct: 209 ARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQ 268

Query: 251 VGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCAKDALKVVGRMGKEGVGFTDYTLVSA 72
            G +D+ +  F ++  +D V +  +I G A NG  +DAL +   M  E      YT+ S 
Sbjct: 269 AGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSV 328

Query: 71  LNACSRILDLKSGKEIHGK 15
           +++C+++  L  G+ +HGK
Sbjct: 329 VSSCAKLASLYHGQVVHGK 347


>ref|XP_002526186.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534490|gb|EEF36190.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/106 (56%), Positives = 80/106 (75%)
 Frame = -3

Query: 326 ARHLFDSMSRRDVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCA 147
           AR+LFD MS RD+F++NAMLS Y K G V+D++  F+ MP RDSVS+NTVI+G A NG A
Sbjct: 78  ARYLFDKMSYRDIFSWNAMLSLYAKAGLVEDLRVVFDDMPSRDSVSYNTVITGFAKNGRA 137

Query: 146 KDALKVVGRMGKEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIV 9
             A++   RM  EG   T+YT VS LNAC+++LDL+ GK+IHG+I+
Sbjct: 138 GKAVEAFVRMQTEGFKPTEYTHVSVLNACTQLLDLRKGKQIHGRIL 183


>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/106 (49%), Positives = 80/106 (75%)
 Frame = -3

Query: 326 ARHLFDSMSRRDVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCA 147
           A++LFD M +RD F++NA+LS Y K G + ++K  F++MP RDSVS+NT I+G + N C 
Sbjct: 77  AQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136

Query: 146 KDALKVVGRMGKEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIV 9
           +++L++  RM +EG   T+YT+VS LNA +++LDL+ GK+IHG I+
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSII 182



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/95 (30%), Positives = 53/95 (55%)
 Frame = -3

Query: 293 DVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCAKDALKVVGRMG 114
           D  T + +++ YC+ G VD+ +  F +   +D V +  ++ G A NG  +DAL +   M 
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314

Query: 113 KEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIV 9
            E +    YTL S +++C+++  L  G+ +HGK +
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%)
 Frame = -3

Query: 278 NAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCAKDALKVVGRMGKEGVG 99
           +A++  Y K G +DD +  F  MP R+ VS+N +I G A NG  KDAL++   M ++   
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFK 420

Query: 98  FTDYTLVSALNACSRILDLKSGKEIHGKI 12
             + T +  L+AC     ++ G+E    I
Sbjct: 421 PDNVTFIGILSACLHCNWIEQGQEYFDSI 449


>ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/106 (51%), Positives = 84/106 (79%)
 Frame = -3

Query: 326 ARHLFDSMSRRDVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCA 147
           A+++FD+M++RDV+++N +LS Y K+G V+++   F+QMP RDSVS+NT+I+  ASNG +
Sbjct: 77  AQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHS 136

Query: 146 KDALKVVGRMGKEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIV 9
             ALKV+ RM ++G   T Y+ V+AL ACS++LDL+ GK+IHG+IV
Sbjct: 137 GKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIV 182



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
 Frame = -3

Query: 320 HLFDSMS----RRDVFTYNAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNG 153
           HLF+ M     + D+ T + +L+ Y + G VDD +  F ++P +D + + T+I G A NG
Sbjct: 242 HLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNG 301

Query: 152 CAKDALKVVGRMGKEGVGFTDYTLVSALNACSRILDLKSGKEIHGKIV 9
             +DA  + G M +  V    YT+ S +++C+++  L  G+ +HGK+V
Sbjct: 302 REEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVV 349



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/89 (33%), Positives = 47/89 (52%)
 Frame = -3

Query: 278 NAMLSGYCKVGCVDDVKGFFEQMPCRDSVSFNTVISGLASNGCAKDALKVVGRMGKEGVG 99
           +A++  YCK G   D +  FE MP R+ +++N +I G A NG   +AL +  RM +E   
Sbjct: 361 SALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFK 420

Query: 98  FTDYTLVSALNACSRILDLKSGKEIHGKI 12
             + T V  L+AC     +K G++    I
Sbjct: 421 PDNITFVGVLSACINADMVKEGQKYFDSI 449