BLASTX nr result

ID: Bupleurum21_contig00038676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038676
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    67   2e-09
ref|NP_001235218.1| uncharacterized protein LOC100527633 [Glycin...    55   6e-06
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    55   6e-06

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/114 (28%), Positives = 57/114 (50%)
 Frame = +2

Query: 5   KIWDVKALSPEVAINRSMRQINDWCNVRQSQLNAQRNCALNTSKTSSKWEAPRTGVLKLN 184
           K+WD +     +A+  +   +  W    Q+  N+       + + +  W+ P  G LK N
Sbjct: 13  KVWDGQLQPSNIAVQLARELLFQW----QAARNSATTQVQQSPQDTIAWQPPAAGFLKCN 68

Query: 185 VDASVFSGANSFTLGLVLRNVNSSFVRGRTIRFEGCVSVYEAETVGVLEDLSWI 346
           VDA++FS  N F  G+ +R+    F++  T  +EGC    EAE VG+ + + W+
Sbjct: 69  VDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWL 122


>ref|NP_001235218.1| uncharacterized protein LOC100527633 [Glycine max]
           gi|255632818|gb|ACU16762.1| unknown [Glycine max]
          Length = 165

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/115 (29%), Positives = 60/115 (52%)
 Frame = +2

Query: 2   IKIWDVKALSPEVAINRSMRQINDWCNVRQSQLNAQRNCALNTSKTSSKWEAPRTGVLKL 181
           +K+W     S  ++++ S + + +W + R+       N     S+  + W  P +G LKL
Sbjct: 41  LKLWK----SHIISLSNSSQLLVEWKHERKRN---SVNTPSPQSQAHAIWIPPTSGSLKL 93

Query: 182 NVDASVFSGANSFTLGLVLRNVNSSFVRGRTIRFEGCVSVYEAETVGVLEDLSWI 346
           NVDA++F   + F  G+ +R+ N  F++ RT    G  S  EAE   +L+ ++WI
Sbjct: 94  NVDAAIFLSISCFGAGMCIRDENGRFLQARTQWNYGEPSPLEAEAWALLQGINWI 148


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/113 (30%), Positives = 55/113 (48%)
 Frame = +2

Query: 8   IWDVKALSPEVAINRSMRQINDWCNVRQSQLNAQRNCALNTSKTSSKWEAPRTGVLKLNV 187
           IW  +A+  +  I+ S+  + DW + R   L + +  +   + T  KW  P  G+LK NV
Sbjct: 313 IWSSQAILLK-DISASLSFLKDWLDAR---LGSDQKLSNGNANTQVKWSKPSPGMLKCNV 368

Query: 188 DASVFSGANSFTLGLVLRNVNSSFVRGRTIRFEGCVSVYEAETVGVLEDLSWI 346
           DA +FS   +  LG++LRN   S     +    G  S   AE +G+ E   W+
Sbjct: 369 DAXIFSKHQTIGLGVILRNEFGSVXGCYSKVVNGVSSPKXAEALGLREAARWL 421


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