BLASTX nr result

ID: Bupleurum21_contig00038666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038666
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             158   5e-37
emb|CAN76262.1| hypothetical protein VITISV_000565 [Vitis vinifera]   158   5e-37
emb|CAN64574.1| hypothetical protein VITISV_003431 [Vitis vinifera]   157   6e-37
emb|CAN72897.1| hypothetical protein VITISV_003776 [Vitis vinifera]   157   8e-37
emb|CAN62989.1| hypothetical protein VITISV_023577 [Vitis vinifera]   157   8e-37

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  158 bits (399), Expect = 5e-37
 Identities = 70/109 (64%), Positives = 89/109 (81%)
 Frame = +3

Query: 3    AEAFAKVRDKEVKSFIWKHIICRFGVPKEIVTDNGSQFISNDFQDFCQEWGIKLSYSTPR 182
            AEA+  ++D  VK+FIWK+IICR GVP EIVTDNG QFIS++F  FC +WGIK+SYSTPR
Sbjct: 852  AEAYVGIKDSAVKTFIWKNIICRHGVPYEIVTDNGPQFISHEFDAFCADWGIKVSYSTPR 911

Query: 183  YPQANGQAESTNKSVVTSLKKRLDKAKGGWVDELPGVLWAYRTSAKTST 329
            YPQ NGQAE+ NK+++++LKKRL+  KGGW +EL  VLWAYRT+ +  T
Sbjct: 912  YPQGNGQAEAANKTILSNLKKRLNHLKGGWYEELQPVLWAYRTTPRRPT 960


>emb|CAN76262.1| hypothetical protein VITISV_000565 [Vitis vinifera]
          Length = 935

 Score =  158 bits (399), Expect = 5e-37
 Identities = 68/104 (65%), Positives = 91/104 (87%)
 Frame = +3

Query: 3    AEAFAKVRDKEVKSFIWKHIICRFGVPKEIVTDNGSQFISNDFQDFCQEWGIKLSYSTPR 182
            AEA+AK++DK+V  F+WK+I+CRFG+P+ I+ DNG QF S  F++FC E  I+ SYSTPR
Sbjct: 754  AEAYAKIKDKDVTKFVWKNIVCRFGIPQTIIADNGPQFDSIAFRNFCSELNIQNSYSTPR 813

Query: 183  YPQANGQAESTNKSVVTSLKKRLDKAKGGWVDELPGVLWAYRTS 314
            YPQ+NGQAE+TNK+++T+LKKRL++AKG WV+ELPGVLWAYRT+
Sbjct: 814  YPQSNGQAETTNKTLITALKKRLEQAKGKWVEELPGVLWAYRTT 857


>emb|CAN64574.1| hypothetical protein VITISV_003431 [Vitis vinifera]
          Length = 943

 Score =  157 bits (398), Expect = 6e-37
 Identities = 68/104 (65%), Positives = 91/104 (87%)
 Frame = +3

Query: 3    AEAFAKVRDKEVKSFIWKHIICRFGVPKEIVTDNGSQFISNDFQDFCQEWGIKLSYSTPR 182
            AEA+A ++DK+V  F+WK+I+CRFG+P+ I+TDNG QF S  F++FC E  I+ SYSTPR
Sbjct: 732  AEAYAGIKDKDVTKFVWKNIVCRFGIPQTIITDNGPQFDSIAFRNFCSELNIRNSYSTPR 791

Query: 183  YPQANGQAESTNKSVVTSLKKRLDKAKGGWVDELPGVLWAYRTS 314
            YPQ+NGQAE+TNK+++T+LKKRL++AKG WV+ELPGVLWAYRT+
Sbjct: 792  YPQSNGQAEATNKTLITALKKRLEQAKGKWVEELPGVLWAYRTT 835


>emb|CAN72897.1| hypothetical protein VITISV_003776 [Vitis vinifera]
          Length = 959

 Score =  157 bits (397), Expect = 8e-37
 Identities = 68/104 (65%), Positives = 90/104 (86%)
 Frame = +3

Query: 3    AEAFAKVRDKEVKSFIWKHIICRFGVPKEIVTDNGSQFISNDFQDFCQEWGIKLSYSTPR 182
            AEA+A ++DK+V  F+WK+IICRFG+P+ I+ DNG QF S  F++FC E  I+ SYSTPR
Sbjct: 710  AEAYASIKDKDVTKFVWKNIICRFGIPQTIIADNGPQFDSITFRNFCSELNIRNSYSTPR 769

Query: 183  YPQANGQAESTNKSVVTSLKKRLDKAKGGWVDELPGVLWAYRTS 314
            YPQ+NGQAE+TNK+++T+LKKRL++AKG WV+ELPGVLWAYRT+
Sbjct: 770  YPQSNGQAEATNKTLITTLKKRLEQAKGKWVEELPGVLWAYRTT 813


>emb|CAN62989.1| hypothetical protein VITISV_023577 [Vitis vinifera]
          Length = 840

 Score =  157 bits (397), Expect = 8e-37
 Identities = 69/104 (66%), Positives = 90/104 (86%)
 Frame = +3

Query: 3   AEAFAKVRDKEVKSFIWKHIICRFGVPKEIVTDNGSQFISNDFQDFCQEWGIKLSYSTPR 182
           AEA+A ++DK+V  F+WK+IICRFGVP+ I+ DNG QF S  F++FC E  I+ SYSTPR
Sbjct: 591 AEAYASIKDKDVTKFVWKNIICRFGVPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPR 650

Query: 183 YPQANGQAESTNKSVVTSLKKRLDKAKGGWVDELPGVLWAYRTS 314
           YPQ+NGQAE+TNK+++T+LKKRL++AKG WV+ELPGVLWAYRT+
Sbjct: 651 YPQSNGQAEATNKTLITALKKRLEQAKGKWVEELPGVLWAYRTT 694


Top