BLASTX nr result

ID: Bupleurum21_contig00038657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038657
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265639.1| PREDICTED: uncharacterized protein LOC100254...    65   6e-09
ref|XP_002534663.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002321096.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002333729.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002265639.1| PREDICTED: uncharacterized protein LOC100254884 [Vitis vinifera]
          Length = 239

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/123 (37%), Positives = 53/123 (43%)
 Frame = -1

Query: 369 ANFLESTLVRIIAISLLLTDLIFTIXXXXXXXXXXXXXSGQGVEEKWYHWVGIAIXXXXX 190
           A+FLEST V + +I LLLTDLIFT+               +   E WYHWVGI I     
Sbjct: 66  ASFLESTPVHVFSICLLLTDLIFTVLEISSSLLSCSTKENK-KGETWYHWVGIGILGLLC 124

Query: 189 XXXXXXXXXLGGLFFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIVVSLWRVGRVVESA 10
                    LG  FF R                           ++VVSLWRV RVVES 
Sbjct: 125 IKSIALAIALGFSFFWRPGYVVDGAVVIGALFLEAFLEGKGGGLLVVVSLWRVVRVVESV 184

Query: 9   FEL 1
           FEL
Sbjct: 185 FEL 187


>ref|XP_002534663.1| conserved hypothetical protein [Ricinus communis]
           gi|223524810|gb|EEF27720.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/122 (37%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FLESTLVRIIAISLLLTDLIFTIXXXXXXXXXXXXXSGQ-GVEEKWYHWVGIAIXXXXXX 187
           FLEST V  ++I LL  DLI TI                  VE+ WYHWVGI I      
Sbjct: 70  FLESTPVHTVSILLLFMDLILTILELSSSLLSCTPKKNYYKVEKVWYHWVGIGILILLSA 129

Query: 186 XXXXXXXXLGGLFFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIVVSLWRVGRVVESAF 7
                   LG  FFKR                           ++VVSLWRV RVVESAF
Sbjct: 130 KAVALAIGLGRSFFKRPGYVVDGAVASMALFLEAFLEKEGGGLLVVVSLWRVVRVVESAF 189

Query: 6   EL 1
           EL
Sbjct: 190 EL 191


>ref|XP_002321096.1| predicted protein [Populus trichocarpa] gi|222861869|gb|EEE99411.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/122 (33%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FLESTLVRIIAISLLLTDLIFTIXXXXXXXXXXXXXSGQGVEEK-WYHWVGIAIXXXXXX 187
           FLEST V +  ISLLL D+I T+                  + K WYH  GI I      
Sbjct: 69  FLESTPVHVFTISLLLLDVILTVLELSSSLQSCTPEEDHYKKNKVWYHLAGICILSLLSA 128

Query: 186 XXXXXXXXLGGLFFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIVVSLWRVGRVVESAF 7
                    G  FFKR                           ++VVSLWRV R+VESAF
Sbjct: 129 KSVALVVGFGSSFFKRPGYVVDGAVVIGALFLETFLGTKGGGLLVVVSLWRVVRLVESAF 188

Query: 6   EL 1
           EL
Sbjct: 189 EL 190


>ref|XP_002333729.1| predicted protein [Populus trichocarpa] gi|222838309|gb|EEE76674.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 41/122 (33%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
 Frame = -1

Query: 363 FLESTLVRIIAISLLLTDLIFTIXXXXXXXXXXXXXSGQGVEEK-WYHWVGIAIXXXXXX 187
           FLEST V +  ISLLL D+I T+                  + K WYH  GI I      
Sbjct: 69  FLESTPVHVFTISLLLLDVILTVLELSSSLQSCTPEEDHYKKNKVWYHLAGICILSLLSA 128

Query: 186 XXXXXXXXLGGLFFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXVIVVSLWRVGRVVESAF 7
                    G  FFKR                           ++VVSLWRV R+VESAF
Sbjct: 129 KSVALVVGFGSSFFKRPGYVVDGAVVIGALFLETFLGTKGGGLLVVVSLWRVVRLVESAF 188

Query: 6   EL 1
           EL
Sbjct: 189 EL 190


Top