BLASTX nr result

ID: Bupleurum21_contig00038638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038638
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855...   152   2e-35
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   152   2e-35
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   147   9e-34
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   146   2e-33
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   146   2e-33

>ref|XP_003631962.1| PREDICTED: uncharacterized protein LOC100855226 [Vitis vinifera]
          Length = 1011

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = +1

Query: 4    VLSQFISKPRHDHLTAAYRVVRYLKATPGQGIFFAANATPTLTAFCDSDWGGCTNTRHSL 183
            +LSQF+  PR  HL AAY+V+RY+K TPGQGIF  +     LTA+CD+DW  C +TR S 
Sbjct: 806  ILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRST 865

Query: 184  TGYCVLFGSSLISWKSKQQHTVSRSSAESEYRSMADTCCEITWLLNLL 327
            TGYC+ FG++ ISWK+K+Q TVSRSSAE+EYRSMA TCCEITWL +LL
Sbjct: 866  TGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLL 913


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = +1

Query: 4    VLSQFISKPRHDHLTAAYRVVRYLKATPGQGIFFAANATPTLTAFCDSDWGGCTNTRHSL 183
            +LSQF+  PR  HL AAY+V+RY+K TPGQGIF  +     LTA+CD+DW  C +TR S 
Sbjct: 1279 ILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRST 1338

Query: 184  TGYCVLFGSSLISWKSKQQHTVSRSSAESEYRSMADTCCEITWLLNLL 327
            TGYC+ FG++ ISWK+K+Q TVSRSSAE+EYRSMA TCCEITWL +LL
Sbjct: 1339 TGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLL 1386


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/108 (60%), Positives = 84/108 (77%)
 Frame = +1

Query: 4   VLSQFISKPRHDHLTAAYRVVRYLKATPGQGIFFAANATPTLTAFCDSDWGGCTNTRHSL 183
           +LSQF++KP  DHL AA+RV+RYLK  P QG+F+ +N T  L+ FCD+DWG C  TR S+
Sbjct: 198 ILSQFMNKPTEDHLAAAHRVLRYLKGCPAQGVFYPSNQTLQLSVFCDADWGSCPLTRRSV 257

Query: 184 TGYCVLFGSSLISWKSKQQHTVSRSSAESEYRSMADTCCEITWLLNLL 327
           +G CVL G S+ISWK+K+Q  VSRSSAE+EYR+MA  CCE++WL  LL
Sbjct: 258 SGCCVLLGQSVISWKTKKQAIVSRSSAEAEYRAMAHACCEVSWLTRLL 305


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/107 (62%), Positives = 85/107 (79%)
 Frame = +1

Query: 7    LSQFISKPRHDHLTAAYRVVRYLKATPGQGIFFAANATPTLTAFCDSDWGGCTNTRHSLT 186
            LSQFIS+P+  HL AA R++RYLK  PG G+FF +N+   L A+ DSDW  C ++R S+T
Sbjct: 1065 LSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMAYTDSDWARCPDSRRSVT 1124

Query: 187  GYCVLFGSSLISWKSKQQHTVSRSSAESEYRSMADTCCEITWLLNLL 327
            G+CV  G+SL+SWKSK+QH VSRSSAE+EYR+MA+T CEITWLL LL
Sbjct: 1125 GFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITWLLALL 1171


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/107 (62%), Positives = 85/107 (79%)
 Frame = +1

Query: 7    LSQFISKPRHDHLTAAYRVVRYLKATPGQGIFFAANATPTLTAFCDSDWGGCTNTRHSLT 186
            LSQFIS+P+  HL AA R++RYLK  PG G+FF +N+   L A+ DSDW  C ++R S+T
Sbjct: 1090 LSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELRLMAYTDSDWARCPDSRRSVT 1149

Query: 187  GYCVLFGSSLISWKSKQQHTVSRSSAESEYRSMADTCCEITWLLNLL 327
            G+CV  G+SL+SWKSK+QH VSRSSAE+EYR+MA+T CEITWLL LL
Sbjct: 1150 GFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITWLLALL 1196


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