BLASTX nr result

ID: Bupleurum21_contig00038634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038634
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 ...   140   8e-32
ref|XP_002525870.1| transcription factor, putative [Ricinus comm...   139   2e-31
ref|XP_002331077.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   132   3e-29

>ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|222839105|gb|EEE77456.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 2/112 (1%)
 Frame = +1

Query: 61  GHNMVRSSSNYNNMLMGCN--NIASESDEQEDGGGYNNNSSIHGYAYHVARPPQMVKKRY 234
           G  ++ +S+ ++ M+M  N  ++ SESDEQEDGGG             +ARP Q++KKR+
Sbjct: 153 GRKVILASAPHHQMIMSYNMGSLPSESDEQEDGGGVL-----------MARPAQLMKKRF 201

Query: 235 RTKFSQEQKEKMFNFAEKVGWKLQKPEETMVQQFCQEVGVKRRVLKVWMHNN 390
           RTKFSQEQKEKM NFAEKVGWKLQK EET+VQQFCQE+GVKRRVLKVWMHNN
Sbjct: 202 RTKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKVWMHNN 253


>ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 [Vitis vinifera]
          Length = 281

 Score =  140 bits (354), Expect = 8e-32
 Identities = 80/139 (57%), Positives = 93/139 (66%), Gaps = 9/139 (6%)
 Frame = +1

Query: 1   LVLGHHFGT---------TPGFVASRAAQGHNMVRSSSNYNNMLMGCNNIASESDEQEDG 153
           ++LGHH            T   ++SR    H M+ S   YN   MG  ++ SESDEQEDG
Sbjct: 147 VILGHHKNIIGPEALGYPTGTLISSRPPPPHQMIMS---YN---MG--SLPSESDEQEDG 198

Query: 154 GGYNNNSSIHGYAYHVARPPQMVKKRYRTKFSQEQKEKMFNFAEKVGWKLQKPEETMVQQ 333
           GG             VARPPQ+VKKR+RTKFSQEQKEKM +FAEKVGWK+QK EE +VQQ
Sbjct: 199 GGGV-----------VARPPQLVKKRFRTKFSQEQKEKMLSFAEKVGWKIQKQEEAVVQQ 247

Query: 334 FCQEVGVKRRVLKVWMHNN 390
           FCQE+GVKRRVLKVWMHNN
Sbjct: 248 FCQEIGVKRRVLKVWMHNN 266


>ref|XP_002525870.1| transcription factor, putative [Ricinus communis]
           gi|223534875|gb|EEF36564.1| transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score =  139 bits (350), Expect = 2e-31
 Identities = 84/143 (58%), Positives = 95/143 (66%), Gaps = 13/143 (9%)
 Frame = +1

Query: 1   LVLGHH----------FGTTPG-FVASRA--AQGHNMVRSSSNYNNMLMGCNNIASESDE 141
           ++LGHH          + T  G  V SRA  A  H M+ S   YN   MG  ++ SESDE
Sbjct: 160 VILGHHKNILAPEALGYPTGTGTLVPSRATVAPHHQMIMS---YN---MG-GSLPSESDE 212

Query: 142 QEDGGGYNNNSSIHGYAYHVARPPQMVKKRYRTKFSQEQKEKMFNFAEKVGWKLQKPEET 321
           QEDGGG             +ARP Q+VKKRYRTKFSQEQKEKM NFAEKVGWK+QK EE 
Sbjct: 213 QEDGGGVV-----------MARPQQLVKKRYRTKFSQEQKEKMLNFAEKVGWKIQKQEEA 261

Query: 322 MVQQFCQEVGVKRRVLKVWMHNN 390
           +VQQFCQE+GVKRRVLKVWMHNN
Sbjct: 262 VVQQFCQEIGVKRRVLKVWMHNN 284


>ref|XP_002331077.1| predicted protein [Populus trichocarpa] gi|222872805|gb|EEF09936.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/107 (64%), Positives = 84/107 (78%), Gaps = 2/107 (1%)
 Frame = +1

Query: 76  RSSSNYNNMLMGCN--NIASESDEQEDGGGYNNNSSIHGYAYHVARPPQMVKKRYRTKFS 249
           R+++ ++ M+M  N  ++ SESDEQEDGGG             +ARP Q++KKRYRTKF+
Sbjct: 76  RAAAPHHQMIMSYNMGSLPSESDEQEDGGGVV-----------MARPAQLMKKRYRTKFT 124

Query: 250 QEQKEKMFNFAEKVGWKLQKPEETMVQQFCQEVGVKRRVLKVWMHNN 390
           QEQKEKM NFAEKVGWKLQK EET+VQQFCQE+G+KRRVLKVWMHNN
Sbjct: 125 QEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGIKRRVLKVWMHNN 171


>ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 283

 Score =  132 bits (332), Expect = 3e-29
 Identities = 73/134 (54%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
 Frame = +1

Query: 4   VLGHHFGTTP----GF-VASRAAQGHNMVRSSSNYNNMLMGCNNIASESDEQEDGGGYNN 168
           +LG H    P    G+  A+R+   H M+     YN   +G +++ SESDEQEDGGG   
Sbjct: 138 ILGPHKNLLPPEALGYPTAARSVPPHQMIMP---YNIGGIG-HHLPSESDEQEDGGG--G 191

Query: 169 NSSIHGYAYHVARPPQMVKKRYRTKFSQEQKEKMFNFAEKVGWKLQKPEETMVQQFCQEV 348
              +   +  ++   Q+VKKR+RTKFSQEQK+KM NFAEKVGWK+QK EE++VQQFCQE+
Sbjct: 192 GGMVQLSSRPISSQQQLVKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEI 251

Query: 349 GVKRRVLKVWMHNN 390
           GVKRRVLKVWMHNN
Sbjct: 252 GVKRRVLKVWMHNN 265


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