BLASTX nr result

ID: Bupleurum21_contig00038616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038616
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    64   2e-08
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    61   1e-07
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    60   2e-07

>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/62 (53%), Positives = 40/62 (64%)
 Frame = +1

Query: 22   EVVEALGIREALSWIKRKGWIEVVVETDCLVAVQAIRSGSVMLSYFGRVIAQCKQSLEDL 201
            EVVEALG+RE LSWI  +    +VVETDCL+ VQAI+  S     FG +IA C   L+ L
Sbjct: 1686 EVVEALGVREVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHL 1745

Query: 202  KD 207
             D
Sbjct: 1746 VD 1747


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/64 (50%), Positives = 39/64 (60%)
 Frame = +1

Query: 16   DSEVVEALGIREALSWIKRKGWIEVVVETDCLVAVQAIRSGSVMLSYFGRVIAQCKQSLE 195
            D  VVEALG+RE LSWI  +    +VVE DCL  VQAI+  S   + FG +IA C   L+
Sbjct: 1304 DESVVEALGVREVLSWIHERSRSRIVVEIDCLRVVQAIQHKSCPNTSFGFIIADCLDVLQ 1363

Query: 196  DLKD 207
             L D
Sbjct: 1364 HLVD 1367


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/62 (50%), Positives = 39/62 (62%)
 Frame = +1

Query: 22  EVVEALGIREALSWIKRKGWIEVVVETDCLVAVQAIRSGSVMLSYFGRVIAQCKQSLEDL 201
           +VVEALG+RE LSWI  +    +VVETDCL  VQAI+  S   + FG +I  C   L+ L
Sbjct: 713 KVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHL 772

Query: 202 KD 207
            D
Sbjct: 773 VD 774


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