BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038602
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_002530010.1| pentatricopeptide repeat-containing protein,...   154   7e-36
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar...   139   3e-31
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ...   137   9e-31

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  164 bits (415), Expect = 9e-39
 Identities = 83/180 (46%), Positives = 110/180 (61%)
 Frame = +3

Query: 15  MRWPSHCLTHSISQXXXXXXXXXXXXXXXXQGEKLHAFTLTTGLFNSSHSYLPNVVLHMY 194
           M W  H    S+S+                 GE+LHA  +TTG+  +  ++L N +L  Y
Sbjct: 1   MIWSRHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFY 60

Query: 195 SSCGEGRSARKLFDHIPHSRKDSVDWTALMVCYARCGLPTEALYLFSDMQKQSVVLPDDI 374
           +SCG    ARK+FD IPHS KD+VDWT LM C+ R  +  EAL +F +M++   V PD++
Sbjct: 61  ASCGCAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCG-VKPDEV 119

Query: 375 TLVCVFNVCAKLCDKMCGIQGQVCMIKMGWGFSVKTCNAVMDMYVKCGVMSDARKVFDEM 554
           TLVC+F  CA+L D + G QG  CM+KMG G   K CNAVMDMY K G+M +AR+VF EM
Sbjct: 120 TLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEM 179


>ref|XP_002530010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530489|gb|EEF32372.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  154 bits (390), Expect = 7e-36
 Identities = 74/150 (49%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
 Frame = +3

Query: 108 GEKLHAFTLTTGLFNSSHSYLPNVVLHMYSSCGEGRSARKLFDHIPHSRKDSVDWTALMV 287
           G+KLHA  LTTG+  S +++L N +LH+YS CG  R A  LFD IP+S KD+ DWT+L+ 
Sbjct: 43  GKKLHAILLTTGVATSPNAFLLNALLHLYSQCGITRYAHHLFDQIPNSHKDTADWTSLLS 102

Query: 288 CYAR-CGLPTEALYLFSDMQKQSVVLPDDITLVCVFNVCAKLCDKMCGIQGQVCMIKMGW 464
           C A+    P  A  LF +M+K+ V+L DD+  VCVF++CA++ +   G Q   C++KMG+
Sbjct: 103 CLAKHTSTPRNAFSLFEEMRKRGVIL-DDVAFVCVFSLCARVGNLEMGRQAHGCVVKMGF 161

Query: 465 GFSVKTCNAVMDMYVKCGVMSDARKVFDEM 554
           G +VK CNAVM++YVKC +M +A+ VF EM
Sbjct: 162 GINVKVCNAVMNVYVKCRLMGEAKGVFSEM 191


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  143 bits (360), Expect = 2e-32
 Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 2/151 (1%)
 Frame = +3

Query: 108 GEKLHAFTLTTGLFNSS-HSYLPNVVLHMYSSCGEGRSARKLFDHIPHSRKDSVDWTALM 284
           G+KLHA  LT+GL +SS +++L N + H+Y+SCG   SAR LF  IP S KD  DWT L+
Sbjct: 34  GKKLHAVILTSGLASSSPNTFLLNALHHLYASCGVTSSARHLFYQIPRSHKDVTDWTTLL 93

Query: 285 VCYARCGL-PTEALYLFSDMQKQSVVLPDDITLVCVFNVCAKLCDKMCGIQGQVCMIKMG 461
               + G  P+E  + F +M+K+ VVL DD+ ++ VF +C ++ D   G Q Q C++KMG
Sbjct: 94  TSLVQHGTKPSEGFFFFKEMRKEGVVL-DDVAMISVFVLCTRVEDLGMGRQAQGCLVKMG 152

Query: 462 WGFSVKTCNAVMDMYVKCGVMSDARKVFDEM 554
            G  VK CNA+M+MYVKCG++ + R+VF EM
Sbjct: 153 LGLGVKVCNAIMNMYVKCGLVEEVRRVFCEM 183


>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15340, mitochondrial; Flags: Precursor
           gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
           thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  139 bits (350), Expect = 3e-31
 Identities = 69/149 (46%), Positives = 102/149 (68%)
 Frame = +3

Query: 108 GEKLHAFTLTTGLFNSSHSYLPNVVLHMYSSCGEGRSARKLFDHIPHSRKDSVDWTALMV 287
           G++LHA   T+GL  +  SYL N +   Y+S GE  +A+KLFD IP S KD+VDWT L+ 
Sbjct: 25  GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84

Query: 288 CYARCGLPTEALYLFSDMQKQSVVLPDDITLVCVFNVCAKLCDKMCGIQGQVCMIKMGWG 467
            ++R GL   ++ LF +M+++ V + DD+++VC+F VCAKL D     QG    +KMG  
Sbjct: 85  SFSRYGLLVNSMKLFVEMRRKRVEI-DDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143

Query: 468 FSVKTCNAVMDMYVKCGVMSDARKVFDEM 554
            SVK CNA+MDMY KCG++S+ +++F+E+
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEEL 172


>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319557|gb|EFH49979.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score =  137 bits (346), Expect = 9e-31
 Identities = 69/149 (46%), Positives = 99/149 (66%)
 Frame = +3

Query: 108 GEKLHAFTLTTGLFNSSHSYLPNVVLHMYSSCGEGRSARKLFDHIPHSRKDSVDWTALMV 287
           G +LHA   T+GL  +  SYL N +   Y+S GE  +A+KLFD IP S KD+VDWT L+ 
Sbjct: 25  GRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSDKDNVDWTTLLS 84

Query: 288 CYARCGLPTEALYLFSDMQKQSVVLPDDITLVCVFNVCAKLCDKMCGIQGQVCMIKMGWG 467
            ++R GL   ++ LF +M+++ V + D ++LVC+F VCAKL D   G QG    +KMG+ 
Sbjct: 85  SFSRFGLLVNSMKLFVEMRRKRVEI-DHVSLVCLFGVCAKLEDLRFGEQGHGVAVKMGFL 143

Query: 468 FSVKTCNAVMDMYVKCGVMSDARKVFDEM 554
            SVK CNA+MDMY KCG +S+ +++F  +
Sbjct: 144 TSVKVCNALMDMYGKCGFVSEVKRIFQAL 172