BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038600
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]   155   2e-36
ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|NP_190904.1| pentatricopeptide repeat-containing protein [Ar...   134   1e-29
ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29

>emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/107 (68%), Positives = 88/107 (82%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ SK  PD+ LQNHILNMYGKCG L+DA  VFD M ERNVVSWTSVIAGYSQNGQG  A
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148

Query: 142 IKFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVKSEF 2
           ++FY +M + GV+PDQFTFGS+I+A S++ D  LGRQLH +V+KSEF
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEF 195



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ S+    I+ QN +++MY K  ++ DA +VF  M+ R+++SW S+IAG+SQ G    A
Sbjct: 190 VLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249

Query: 142 IKFYIEMQRWGV-VPDQFTFGSVIRASSNVSDFELGRQLHCNVVK 11
           + ++ EM   GV +P++F FGSV  A S++   E GRQLH   +K
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIK 294



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/96 (40%), Positives = 59/96 (61%)
 Frame = -1

Query: 298 DIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQ 119
           DI + N ++++Y KCG L+ A  +FD +   +VVSW+S+I GY+Q G G  A+K +  M+
Sbjct: 503 DISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMR 562

Query: 118 RWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVK 11
           R  V P+  TF  V+ A S+V   E G QL+  + K
Sbjct: 563 RLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEK 598



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/91 (34%), Positives = 54/91 (59%)
 Frame = -1

Query: 298 DIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQ 119
           D+     + +MY KCGLL  A  VF  +   ++V+W ++IAG++  G    AI F+ +M+
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMR 359

Query: 118 RWGVVPDQFTFGSVIRASSNVSDFELGRQLH 26
             G++PD+ T  S++ A ++ S+   G Q+H
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVH 390


>ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/107 (67%), Positives = 87/107 (81%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ SK  PD+ LQNHILNMYGKC  L+DA  VFD M ERNVVSWTSVIAGYSQNGQG  A
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNA 148

Query: 142 IKFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVKSEF 2
           ++FY +M + GV+PDQFTFGS+I+A S++ D  LGRQLH +V+KSEF
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEF 195



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ S+    I+ QN +++MY K  L+ DA +VF  M+ R+++SW S+IAG+SQ G    A
Sbjct: 190 VLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249

Query: 142 IKFYIEMQRWGV-VPDQFTFGSVIRASSNVSDFELGRQLHCNVVK 11
           + ++ EM   GV +P++F FGSV  A S++   E GRQLH   +K
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIK 294



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/96 (39%), Positives = 58/96 (60%)
 Frame = -1

Query: 298 DIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQ 119
           D  + N ++++Y KCG L+ A  +FD M   +VVSW+S+I GY+Q G G  A+K +  M+
Sbjct: 503 DTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMR 562

Query: 118 RWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVK 11
           R  V P+  TF  V+ A S+V   E G +L+  + K
Sbjct: 563 RLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEK 598



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/91 (34%), Positives = 54/91 (59%)
 Frame = -1

Query: 298 DIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQ 119
           D+     + +MY KCGLL  A  VF  +   ++V+W ++IAG++  G    AI F+ +M+
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMR 359

Query: 118 RWGVVPDQFTFGSVIRASSNVSDFELGRQLH 26
             G++PD+ T  S++ A ++ S+   G Q+H
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVH 390


>ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
           gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis
           thaliana] gi|332645554|gb|AEE79075.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/106 (59%), Positives = 82/106 (77%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           +++S CK D +L NHIL+MYGKCG L DA  VFD M ERN+VS+TSVI GYSQNGQG+ A
Sbjct: 93  ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152

Query: 142 IKFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVKSE 5
           I+ Y++M +  +VPDQF FGS+I+A ++ SD  LG+QLH  V+K E
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/95 (38%), Positives = 60/95 (63%)
 Frame = -1

Query: 301 PDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEM 122
           P+  ++N +++MY KCG L  A  +FD M  R+VVSW+++I GY+Q+G G  A+  + EM
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565

Query: 121 QRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNV 17
           +  G+ P+  TF  V+ A S+V   E G +L+  +
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = -1

Query: 295 IVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQR 116
           ++ QN ++ MY +   + DA+ VF G+  ++++SW+S+IAG+SQ G    A+    EM  
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262

Query: 115 WGVV-PDQFTFGSVIRASSNVSDFELGRQLHCNVVKSE 5
           +GV  P+++ FGS ++A S++   + G Q+H   +KSE
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/92 (30%), Positives = 47/92 (51%)
 Frame = -1

Query: 277 ILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQRWGVVPD 98
           + +MY +CG L  A  VFD +   +  SW  +IAG + NG    A+  + +M+  G +PD
Sbjct: 311 LCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPD 370

Query: 97  QFTFGSVIRASSNVSDFELGRQLHCNVVKSEF 2
             +  S++ A +       G Q+H  ++K  F
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402


>ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/107 (58%), Positives = 79/107 (73%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ S C+PD+VLQNHILNMYGKCG L+DA   FD M  RNVVSWT +I+GYSQNGQ + A
Sbjct: 183 ILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDA 242

Query: 142 IKFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVKSEF 2
           I  YI+M + G  PD  TFGS+I+A     D +LGRQLH +V+KS +
Sbjct: 243 IIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGY 289



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/94 (36%), Positives = 55/94 (58%)
 Frame = -1

Query: 319 VSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAI 140
           V S    D+ + N +++MY KCG L+ A +VF      ++VSW+S+I GY+Q G G  A+
Sbjct: 590 VKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEAL 649

Query: 139 KFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELG 38
             +  M+  GV P++ T+  V+ A S++   E G
Sbjct: 650 NLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEG 683



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/91 (35%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = -1

Query: 295 IVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQR 116
           ++ QN +++MY + G +  A++VF  +S ++++SW S+I G++Q G    A+  + +M R
Sbjct: 293 LIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFR 352

Query: 115 WGVV-PDQFTFGSVIRASSNVSDFELGRQLH 26
            G   P++F FGSV  A  ++ + E GRQ+H
Sbjct: 353 QGFYQPNEFIFGSVFSACRSLLEPEFGRQIH 383



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/89 (32%), Positives = 49/89 (55%)
 Frame = -1

Query: 277 ILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQRWGVVPD 98
           + +MY K G L  A   F  +   ++VSW ++IA +S +G  + AI F+ +M   G++PD
Sbjct: 401 LCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPD 460

Query: 97  QFTFGSVIRASSNVSDFELGRQLHCNVVK 11
             TF S++ A  +      G Q+H  ++K
Sbjct: 461 GITFLSLLCACGSPVTINQGTQIHSYIIK 489



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = -1

Query: 283 NHILNMYGKCGLLEDAANVFDGMSER-NVVSWTSVIAGYSQNGQGSVAIKFYIEMQRWGV 107
           N +L MY KC  L DA NVF  +SE  N+VSW ++++   Q+ Q     + +  M     
Sbjct: 500 NSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSEN 559

Query: 106 VPDQFTFGSVIRASSNVSDFELGRQLHCNVVKS 8
            PD  T  +++   + ++  E+G Q+HC  VKS
Sbjct: 560 KPDNITITTILGTCAELASLEVGNQVHCFSVKS 592


>ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/107 (54%), Positives = 84/107 (78%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           +++   +PD++LQNHIL+MYGKCG L++A N+FD M  +NVVSWTS+I+GYS+ G+   A
Sbjct: 124 MLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNA 183

Query: 142 IKFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVKSEF 2
           I  Y++M R G +PD FTFGS++++ S + DF+L RQLH +V+KSEF
Sbjct: 184 ITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEF 230



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/99 (36%), Positives = 60/99 (60%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ S    DI + N ++NMY KCG LE A  +FD +   +++SW+S+I GY+Q G G  A
Sbjct: 530 IMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEA 589

Query: 142 IKFYIEMQRWGVVPDQFTFGSVIRASSNVSDFELGRQLH 26
            + +  M+  GV P++ TF  ++ A S++   E G +L+
Sbjct: 590 FELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = -1

Query: 322 LVSSKCKPDIVLQNHILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVA 143
           ++ S+   D++ QN +++MY K   + DA NVF  +  ++++SW S+IAG+SQ G    A
Sbjct: 225 VLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEA 284

Query: 142 IKFYIEMQRWGVV-PDQFTFGSVIRASSNVSDFELGRQLHCNVVK 11
           +  + EM    V  P++F FGS   A S + + + GRQ+H   +K
Sbjct: 285 LCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIK 329



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = -1

Query: 298 DIVLQNHILNMYGKCGLLEDAANVFDGMSER-NVVSWTSVIAGYSQNGQGSVAIKFYIEM 122
           DI + N +L+MY KC  L DA  VF+ +  + ++VSW +++    Q  Q    ++    M
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLM 495

Query: 121 QRWGVVPDQFTFGSVIRASSNVSDFELGRQLHCNVVKS 8
               + PD  T  +V+ +S  ++ +E+G Q+HC ++KS
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKS 533



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/92 (32%), Positives = 51/92 (55%)
 Frame = -1

Query: 277 ILNMYGKCGLLEDAANVFDGMSERNVVSWTSVIAGYSQNGQGSVAIKFYIEMQRWGVVPD 98
           + +MY KCG LE A  VF  + + ++V+W ++IAG++       +  F+ +M+  G+VP+
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 97  QFTFGSVIRASSNVSDFELGRQLHCNVVKSEF 2
             T  S++ A S       G Q+H  +VK  F
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF 433