BLASTX nr result

ID: Bupleurum21_contig00038581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038581
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...    90   2e-16
ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250...    89   4e-16
emb|CBI16424.3| unnamed protein product [Vitis vinifera]               89   4e-16

>ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322  DIIGKSVMLEPFDHPGTIVMHNSKNTNIVV-KAASDQSHSVFRVVHGLDKKD-SVSLESE 149
            D+IGKSVMLEPF  PG +++   K+ +  +  +A D   S+FRVV GLD KD +VSLES 
Sbjct: 716  DVIGKSVMLEPFHLPGMLLVQQGKDRSFTLTNSADDDGSSIFRVVSGLDGKDGTVSLESG 775

Query: 148  SLKGCFVY--VEQKLGAVVKLKCSSNSTNYALFNEAASFRLRDGVSKYDPV 2
               GC+VY  V+ K G  +KL C S S++   FN+ ASF +  G+S+Y P+
Sbjct: 776  IQNGCYVYSGVDYKSGQSMKLSCKSGSSSDTGFNQGASFVMNKGLSQYHPI 826


>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
            predicted protein [Populus trichocarpa]
          Length = 858

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/117 (46%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
 Frame = -1

Query: 340  ENLMANDIIGKSVMLEPFDHPGTIVMHNSKNTNI-VVKAASDQSHSVFRVVHGLDKKD-S 167
            E L  ND+I KSVMLEPFD PG +++   K++++ V  +A+D   S+F VV GLD KD +
Sbjct: 711  EVLGINDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGT 770

Query: 166  VSLESESLKGCFVY--VEQKLGAVVKLKCSSNSTNYALFNEAASFRLRDGVSKYDPV 2
            VSLES S +GC++Y  V  K G  +KL C   S++   FN+ ASF +  G+S+Y P+
Sbjct: 771  VSLESGSQEGCYIYSGVNYKSGQSMKLSCKLGSSDPG-FNQGASFVMNKGLSEYHPI 826


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
 Frame = -1

Query: 334  LMANDIIGKSVMLEPFDHPGTIVMHNSKNTNIVVKAASDQSHSVFRVVHGLDKKD-SVSL 158
            L   D IGKSVMLEP D PG +V+    N N+ +  ++    S+F +V GLD KD +VSL
Sbjct: 718  LSPKDAIGKSVMLEPIDLPGMVVVQQGTNQNLGIANSAAGKGSLFHLVAGLDGKDGTVSL 777

Query: 157  ESESLKGCFVY--VEQKLGAVVKLKCSSNS-TNYALFNEAASFRLRDGVSKYDPV 2
            ESES K C+VY  ++   G  +KLK  S S ++   FN+A SF L++G+S+Y P+
Sbjct: 778  ESESQKDCYVYSGIDYNSGTSIKLKSLSESGSSDEDFNKATSFILKEGISQYHPI 832


>ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera]
          Length = 874

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322  DIIGKSVMLEPFDHPGTIVMHNSKNTNI-VVKAASDQSHSVFRVVHGLDKKD-SVSLESE 149
            D IGK VMLEP + PG  V+    N ++ +  +AS    S+F +V GLD KD +VSLES+
Sbjct: 725  DAIGKFVMLEPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESK 784

Query: 148  SLKGCFVY--VEQKLGAVVKLKCSSNSTNYALFNEAASFRLRDGVSKYDPV 2
            + KGCFVY  V    G+ +KLKC   S++  +FN+A SF L+ G+S+Y P+
Sbjct: 785  TQKGCFVYSDVNYDSGSAIKLKCKLASSD-VVFNQATSFTLKHGISEYHPI 834


>emb|CBI16424.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/111 (45%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322 DIIGKSVMLEPFDHPGTIVMHNSKNTNI-VVKAASDQSHSVFRVVHGLDKKD-SVSLESE 149
           D IGK VMLEP + PG  V+    N ++ +  +AS    S+F +V GLD KD +VSLES+
Sbjct: 592 DAIGKFVMLEPINFPGMAVVQRGTNESLGITNSASVVGSSLFHLVAGLDGKDGTVSLESK 651

Query: 148 SLKGCFVY--VEQKLGAVVKLKCSSNSTNYALFNEAASFRLRDGVSKYDPV 2
           + KGCFVY  V    G+ +KLKC   S++  +FN+A SF L+ G+S+Y P+
Sbjct: 652 TQKGCFVYSDVNYDSGSAIKLKCKLASSD-VVFNQATSFTLKHGISEYHPI 701


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