BLASTX nr result

ID: Bupleurum21_contig00038573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038573
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ67301.1| chitinase 2 [Populus x canadensis]                     134   8e-30
ref|XP_002867920.1| glycosyl hydrolase family 18 protein [Arabid...   134   1e-29
pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase Fro...   132   2e-29
dbj|BAE99745.1| putative chitinase [Arabidopsis thaliana]             132   2e-29
ref|NP_193716.1| Glycosyl hydrolase family protein with chitinas...   132   2e-29

>gb|AEZ67301.1| chitinase 2 [Populus x canadensis]
          Length = 370

 Score =  134 bits (337), Expect = 8e-30
 Identities = 69/107 (64%), Positives = 79/107 (73%)
 Frame = -3

Query: 322 SNTVLFSQFTRNVQLKNPSVKTLLSIGGGLSKPADFASMARSPASRKSFIDSSLKLARSN 143
           SN   F  FT+ VQ KNPSVKTLLSIGGG S    FASMA   +SRKSFIDSS+KLARSN
Sbjct: 71  SNQAQFQTFTKTVQQKNPSVKTLLSIGGGGSDVNTFASMASQSSSRKSFIDSSIKLARSN 130

Query: 142 NFIGLDLDWQYPLVANDMDNLATLLDEWRVAADAEAKASGKPRLLLT 2
           NF+GLDLDW+YP  +  M+N  TLL EWR A   EAK+SGK  L+L+
Sbjct: 131 NFLGLDLDWEYPSDSTQMNNFGTLLTEWRAAVVTEAKSSGKTPLMLS 177


>ref|XP_002867920.1| glycosyl hydrolase family 18 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313756|gb|EFH44179.1| glycosyl hydrolase
           family 18 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/106 (64%), Positives = 80/106 (75%)
 Frame = -3

Query: 322 SNTVLFSQFTRNVQLKNPSVKTLLSIGGGLSKPADFASMARSPASRKSFIDSSLKLARSN 143
           +N   FS FT+ VQ +NPSVKTLLSIGGG++    +ASMA +P SRKSFIDSS++LARS 
Sbjct: 71  ANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRLARSY 130

Query: 142 NFIGLDLDWQYPLVANDMDNLATLLDEWRVAADAEAKASGKPRLLL 5
            F GLDLDW+YP  A +M N  TLL EWR A  AEA +SGKPRLLL
Sbjct: 131 GFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLL 176


>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis
           Thaliana gi|340780339|pdb|3AQU|B Chain B, Crystal
           Structure Of A Class V Chitinase From Arabidopsis
           Thaliana gi|340780340|pdb|3AQU|C Chain C, Crystal
           Structure Of A Class V Chitinase From Arabidopsis
           Thaliana gi|340780341|pdb|3AQU|D Chain D, Crystal
           Structure Of A Class V Chitinase From Arabidopsis
           Thaliana
          Length = 356

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/106 (63%), Positives = 80/106 (75%)
 Frame = -3

Query: 322 SNTVLFSQFTRNVQLKNPSVKTLLSIGGGLSKPADFASMARSPASRKSFIDSSLKLARSN 143
           +N   FS FT+ VQ +NPSVKTLLSIGGG++    +ASMA +P SRKSFIDSS+++ARS 
Sbjct: 48  ANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSY 107

Query: 142 NFIGLDLDWQYPLVANDMDNLATLLDEWRVAADAEAKASGKPRLLL 5
            F GLDLDW+YP  A +M N  TLL EWR A  AEA +SGKPRLLL
Sbjct: 108 GFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLL 153


>dbj|BAE99745.1| putative chitinase [Arabidopsis thaliana]
          Length = 337

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/106 (63%), Positives = 80/106 (75%)
 Frame = -3

Query: 322 SNTVLFSQFTRNVQLKNPSVKTLLSIGGGLSKPADFASMARSPASRKSFIDSSLKLARSN 143
           +N   FS FT+ VQ +NPSVKTLLSIGGG++    +ASMA +P SRKSFIDSS+++ARS 
Sbjct: 29  ANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSY 88

Query: 142 NFIGLDLDWQYPLVANDMDNLATLLDEWRVAADAEAKASGKPRLLL 5
            F GLDLDW+YP  A +M N  TLL EWR A  AEA +SGKPRLLL
Sbjct: 89  GFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLL 134


>ref|NP_193716.1| Glycosyl hydrolase family protein with chitinase insertion domain
           [Arabidopsis thaliana] gi|3250690|emb|CAA19698.1|
           putative chitinase [Arabidopsis thaliana]
           gi|7268777|emb|CAB78983.1| putative chitinase
           [Arabidopsis thaliana] gi|119360133|gb|ABL66795.1|
           At4g19810 [Arabidopsis thaliana]
           gi|332658828|gb|AEE84228.1| Glycosyl hydrolase family
           protein with chitinase insertion domain [Arabidopsis
           thaliana]
          Length = 379

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/106 (63%), Positives = 80/106 (75%)
 Frame = -3

Query: 322 SNTVLFSQFTRNVQLKNPSVKTLLSIGGGLSKPADFASMARSPASRKSFIDSSLKLARSN 143
           +N   FS FT+ VQ +NPSVKTLLSIGGG++    +ASMA +P SRKSFIDSS+++ARS 
Sbjct: 71  ANQPKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSY 130

Query: 142 NFIGLDLDWQYPLVANDMDNLATLLDEWRVAADAEAKASGKPRLLL 5
            F GLDLDW+YP  A +M N  TLL EWR A  AEA +SGKPRLLL
Sbjct: 131 GFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLL 176


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