BLASTX nr result

ID: Bupleurum21_contig00038560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038560
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274844.1| PREDICTED: uncharacterized protein LOC100265...   139   2e-31
emb|CAN65044.1| hypothetical protein VITISV_015247 [Vitis vinifera]   135   3e-30
ref|XP_002274757.2| PREDICTED: probable cysteine desulfurase-lik...   134   1e-29
ref|XP_004172179.1| PREDICTED: uncharacterized protein LOC101232...   125   3e-27
ref|XP_004148652.1| PREDICTED: probable cysteine desulfurase-lik...   125   3e-27

>ref|XP_002274844.1| PREDICTED: uncharacterized protein LOC100265977 [Vitis vinifera]
          Length = 658

 Score =  139 bits (350), Expect = 2e-31
 Identities = 73/124 (58%), Positives = 87/124 (70%), Gaps = 12/124 (9%)
 Frame = +2

Query: 2   YKAIEIQEYKYIKRALERLLPNPNIRILGNTNKSRQSVISFLVQSTDHSSYGICMEDND- 178
           Y  IE  E+ YI+ ALERLLPNPNI++LGNT+  RQ+++SFLV ST +SS     +    
Sbjct: 388 YNVIEQMEHMYIEAALERLLPNPNIKVLGNTSAKRQAILSFLVYSTTNSSSDGMKDSRGD 447

Query: 179 --------RETGNK---PLHGRFVAKLLNDLFGIQARGGCVCAAPYGHKLLHIDETTSSS 325
                   RETGNK   PLHG FVAKLLNDLFGIQARGGC CA PYGH LL++DET S +
Sbjct: 448 IEGRFYMWRETGNKRGKPLHGPFVAKLLNDLFGIQARGGCACAGPYGHSLLNVDETRSLA 507

Query: 326 IRSS 337
            RS+
Sbjct: 508 FRSA 511


>emb|CAN65044.1| hypothetical protein VITISV_015247 [Vitis vinifera]
          Length = 461

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/115 (60%), Positives = 83/115 (72%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   YKAIEIQEYKYIKRALERLLPNPNIRILGNTNKSRQSVISFLVQSTDHSSYGICMEDNDR 181
           Y  IE +E  Y + ALERLLPNPNI +LGNT   RQ+++SFLV ST +S+       +D 
Sbjct: 214 YNVIEEEENNYTEAALERLLPNPNIWVLGNTTAKRQAILSFLVYSTTNSA------SDDM 267

Query: 182 ETGN---KPLHGRFVAKLLNDLFGIQARGGCVCAAPYGHKLLHIDETTSSSIRSS 337
           +TGN   KPLHG FVAKLLNDLFGIQARGGC CA PYGH LL +DET S + RS+
Sbjct: 268 KTGNRKDKPLHGPFVAKLLNDLFGIQARGGCACAGPYGHSLLKVDETQSLAFRSA 322


>ref|XP_002274757.2| PREDICTED: probable cysteine desulfurase-like [Vitis vinifera]
          Length = 636

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/122 (58%), Positives = 83/122 (68%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   YKAIEIQEYKYIKRALERLLPNPNIRILGNTNKSRQSVISFLVQSTDHSSYGICMEDND- 178
           Y  IE +E  Y + ALERLLPNPNI +LGNT   RQ+++SFLV ST +S+      +   
Sbjct: 389 YNVIEEEENNYTEAALERLLPNPNIWVLGNTTAKRQAILSFLVYSTTNSASDDMSREETK 448

Query: 179 ------RETGN---KPLHGRFVAKLLNDLFGIQARGGCVCAAPYGHKLLHIDETTSSSIR 331
                 RETGN   KPLHG FVAKLLNDLFGIQARGGC CA PYGH LL +DET S + R
Sbjct: 449 GRFYMWRETGNRKDKPLHGPFVAKLLNDLFGIQARGGCACAGPYGHSLLKVDETQSLAFR 508

Query: 332 SS 337
           S+
Sbjct: 509 SA 510


>ref|XP_004172179.1| PREDICTED: uncharacterized protein LOC101232076 [Cucumis sativus]
          Length = 644

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 18/130 (13%)
 Frame = +2

Query: 2   YKAIEIQEYKYIKRALERLLPNPNIRILGNTNKSRQSVISFLVQSTDHSSYGICMED--- 172
           Y+ IE QE++YI+RAL+RLLPN +I ILG+T+  RQ+++SF++ S+ ++S   C+ D   
Sbjct: 381 YQEIEKQEHRYIERALKRLLPNRSISILGSTSTKRQAILSFIIYSSTNNSLPNCITDMLG 440

Query: 173 --NDRE----------TGN---KPLHGRFVAKLLNDLFGIQARGGCVCAAPYGHKLLHID 307
             N RE          TG+   KPLHG FVA LL+DLFG+QARGGC CA PYGHKLL+ID
Sbjct: 441 NPNSREKVKKLYMWEETGSMRAKPLHGPFVAALLSDLFGVQARGGCSCAGPYGHKLLNID 500

Query: 308 ETTSSSIRSS 337
           E  S + R++
Sbjct: 501 EACSQAYRTA 510


>ref|XP_004148652.1| PREDICTED: probable cysteine desulfurase-like [Cucumis sativus]
          Length = 644

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 18/130 (13%)
 Frame = +2

Query: 2   YKAIEIQEYKYIKRALERLLPNPNIRILGNTNKSRQSVISFLVQSTDHSSYGICMED--- 172
           Y+ IE QE++YI+RAL+RLLPN +I ILG+T+  RQ+++SF++ S+ ++S   C+ D   
Sbjct: 381 YQEIEKQEHRYIERALKRLLPNRSISILGSTSTKRQAILSFIIYSSTNNSLPNCITDMLG 440

Query: 173 --NDRE----------TGN---KPLHGRFVAKLLNDLFGIQARGGCVCAAPYGHKLLHID 307
             N RE          TG+   KPLHG FVA LL+DLFG+QARGGC CA PYGHKLL+ID
Sbjct: 441 NPNSREKVKKLYMWEETGSMRAKPLHGPFVAALLSDLFGVQARGGCSCAGPYGHKLLNID 500

Query: 308 ETTSSSIRSS 337
           E  S + R++
Sbjct: 501 EACSQAYRTA 510


Top