BLASTX nr result

ID: Bupleurum21_contig00038511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038511
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533809.1| conserved hypothetical protein [Ricinus comm...   132   2e-34
ref|XP_003612112.1| Transmembrane and coiled-coil domain-contain...   132   7e-34
ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...   131   2e-33
ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein ...   130   3e-33
ref|XP_003520272.1| PREDICTED: uncharacterized membrane protein ...   129   8e-33

>ref|XP_002533809.1| conserved hypothetical protein [Ricinus communis]
           gi|223526263|gb|EEF28578.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 713

 Score =  132 bits (332), Expect(2) = 2e-34
 Identities = 61/80 (76%), Positives = 72/80 (90%)
 Frame = +2

Query: 59  AAGAGLSGMKMASRIGNLEDFEFRVVGENNNQSRLAVEILISGFVFEEEDYIRPWEGQAN 238
           AAGAGL+G KMA R GN+++FEF+ +GEN+NQ RLAVEIL+SGFVF+EED+IRPWEGQ +
Sbjct: 425 AAGAGLAGTKMARRTGNVDEFEFKAIGENHNQGRLAVEILVSGFVFDEEDFIRPWEGQID 484

Query: 239 NSERYALQWESKNLIAVSTA 298
           N ERY LQWESKNLIAVSTA
Sbjct: 485 NLERYVLQWESKNLIAVSTA 504



 Score = 38.5 bits (88), Expect(2) = 2e-34
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 3   ITGGLAAPGIAAGFGALTPLL 65
           ITGGLAAP IAAGFGAL P L
Sbjct: 371 ITGGLAAPAIAAGFGALAPTL 391


>ref|XP_003612112.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|355513447|gb|AES95070.1| Transmembrane
           and coiled-coil domain-containing protein [Medicago
           truncatula]
          Length = 717

 Score =  132 bits (333), Expect(2) = 7e-34
 Identities = 60/80 (75%), Positives = 74/80 (92%)
 Frame = +2

Query: 59  AAGAGLSGMKMASRIGNLEDFEFRVVGENNNQSRLAVEILISGFVFEEEDYIRPWEGQAN 238
           AAGAGL+G KMA R+G++++FEFR +G+N+NQ RLAVEIL+SGFVFEE+D++RPWEGQ +
Sbjct: 384 AAGAGLTGTKMARRVGSVDEFEFRAIGDNHNQGRLAVEILVSGFVFEEDDFVRPWEGQND 443

Query: 239 NSERYALQWESKNLIAVSTA 298
           N ERYALQWESKNLIAVSTA
Sbjct: 444 NLERYALQWESKNLIAVSTA 463



 Score = 36.2 bits (82), Expect(2) = 7e-34
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 3   ITGGLAAPGIAAGFGALTPLL 65
           ITGGLAAP IAAG GAL P L
Sbjct: 330 ITGGLAAPAIAAGLGALAPTL 350


>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
           protein product [Vitis vinifera]
          Length = 662

 Score =  131 bits (329), Expect(2) = 2e-33
 Identities = 61/80 (76%), Positives = 72/80 (90%)
 Frame = +2

Query: 59  AAGAGLSGMKMASRIGNLEDFEFRVVGENNNQSRLAVEILISGFVFEEEDYIRPWEGQAN 238
           AAGAGL+G KMA R G++++FEF+ +GEN+NQ RLAVEIL+SGFVF+EED+I PWEGQ N
Sbjct: 372 AAGAGLTGSKMARRTGSVDEFEFKAIGENHNQGRLAVEILVSGFVFQEEDFISPWEGQNN 431

Query: 239 NSERYALQWESKNLIAVSTA 298
           N ERYALQWESKNLIAVSTA
Sbjct: 432 NLERYALQWESKNLIAVSTA 451



 Score = 36.2 bits (82), Expect(2) = 2e-33
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 3   ITGGLAAPGIAAGFGALTPLL 65
           ITGGLAAP IAAGF AL P L
Sbjct: 318 ITGGLAAPAIAAGFSALAPTL 338


>ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
           max]
          Length = 676

 Score =  130 bits (328), Expect(2) = 3e-33
 Identities = 60/80 (75%), Positives = 72/80 (90%)
 Frame = +2

Query: 59  AAGAGLSGMKMASRIGNLEDFEFRVVGENNNQSRLAVEILISGFVFEEEDYIRPWEGQAN 238
           AAGAGL+G KMA R+G +++FEF+ +GEN+NQ RL VEIL+SGFVFE+ED+IRPWEGQ +
Sbjct: 388 AAGAGLTGSKMARRVGGVDEFEFKAIGENHNQGRLGVEILVSGFVFEKEDFIRPWEGQND 447

Query: 239 NSERYALQWESKNLIAVSTA 298
           N ERYALQWESKNLIAVSTA
Sbjct: 448 NLERYALQWESKNLIAVSTA 467



 Score = 36.2 bits (82), Expect(2) = 3e-33
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 3   ITGGLAAPGIAAGFGALTPLL 65
           ITGGLAAP IAAG GAL P L
Sbjct: 334 ITGGLAAPAIAAGLGALAPTL 354


>ref|XP_003520272.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
           max]
          Length = 680

 Score =  129 bits (324), Expect(2) = 8e-33
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 59  AAGAGLSGMKMASRIGNLEDFEFRVVGENNNQSRLAVEILISGFVFEEEDYIRPWEGQAN 238
           AAGAGL+G KMA R+G +++FEF+ +GEN+NQ RL VEIL+SGFVFE+ED+IRPWEGQ +
Sbjct: 390 AAGAGLTGSKMARRVGGVDEFEFKAIGENHNQGRLGVEILVSGFVFEKEDFIRPWEGQND 449

Query: 239 NSERYALQWESKNLIAVSTA 298
           N ERYALQWES+NLIAVSTA
Sbjct: 450 NLERYALQWESENLIAVSTA 469



 Score = 36.2 bits (82), Expect(2) = 8e-33
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 3   ITGGLAAPGIAAGFGALTPLL 65
           ITGGLAAP IAAG GAL P L
Sbjct: 336 ITGGLAAPAIAAGLGALAPTL 356


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