BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038487
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15662.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]   176   2e-42
ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
ref|XP_002511191.1| pentatricopeptide repeat-containing protein,...   157   9e-37

>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/141 (62%), Positives = 108/141 (76%)
 Frame = -3

Query: 423 KLKIPFFQIGCSYVEQGLKPRPVPKPSKIELEVKTIDHVDKTRIGSSTSGLAAQIEKLVV 244
           K + PF QI CS +EQGL+PRP PKPS IEL V     V++T++   +S L  QIEKLV 
Sbjct: 48  KRRTPFSQIRCSSLEQGLQPRPKPKPSTIELNVGKEAQVNETQLRKPSSELCGQIEKLVF 107

Query: 243 LKRYKEALELFEILECEGDHDVGISTYDALVNACIGLRSVKGVKRVFSYMIKSDFEPDQY 64
            KRY EALELFEILE  G +D+   TYDALV+ACIGL+S++GVK+VF+YMI S  +PD+Y
Sbjct: 108 FKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEY 167

Query: 63  LRNRMLLMHVRCNMMIDARYL 1
           LRNR+LLMHV+C MMIDAR L
Sbjct: 168 LRNRVLLMHVKCGMMIDARRL 188


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/141 (62%), Positives = 108/141 (76%)
 Frame = -3

Query: 423 KLKIPFFQIGCSYVEQGLKPRPVPKPSKIELEVKTIDHVDKTRIGSSTSGLAAQIEKLVV 244
           K + PF QI CS +EQGL+PRP PKPS IEL V     V++T++   +S L  QIEKLV 
Sbjct: 48  KRRTPFSQIRCSSLEQGLQPRPKPKPSTIELNVGKEAQVNETQLRKPSSELCGQIEKLVF 107

Query: 243 LKRYKEALELFEILECEGDHDVGISTYDALVNACIGLRSVKGVKRVFSYMIKSDFEPDQY 64
            KRY EALELFEILE  G +D+   TYDALV+ACIGL+S++GVK+VF+YMI S  +PD+Y
Sbjct: 108 FKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEY 167

Query: 63  LRNRMLLMHVRCNMMIDARYL 1
           LRNR+LLMHV+C MMIDAR L
Sbjct: 168 LRNRVLLMHVKCGMMIDARRL 188


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/141 (62%), Positives = 108/141 (76%)
 Frame = -3

Query: 423 KLKIPFFQIGCSYVEQGLKPRPVPKPSKIELEVKTIDHVDKTRIGSSTSGLAAQIEKLVV 244
           K + PF QI CS +EQGL+PRP PKPS IEL V     V++T++   +S L  QIEKLV 
Sbjct: 48  KRRTPFSQIRCSSLEQGLQPRPKPKPSTIELNVGKEAQVNETQLRKPSSELCGQIEKLVF 107

Query: 243 LKRYKEALELFEILECEGDHDVGISTYDALVNACIGLRSVKGVKRVFSYMIKSDFEPDQY 64
            KRY EALELFEILE  G +D+   TYDALV+ACIGL+S++GVK+VF+YMI S  +PD+Y
Sbjct: 108 FKRYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEY 167

Query: 63  LRNRMLLMHVRCNMMIDARYL 1
           LRNR+LLMHV+C MMIDAR L
Sbjct: 168 LRNRVLLMHVKCGMMIDARRL 188


>ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
           gi|449517215|ref|XP_004165641.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/140 (55%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
 Frame = -3

Query: 423 KLKIPFFQIGCSYVEQGLKPRP--VPKPSKIELEVKTIDHVDKTRIGSSTSGLAAQIEKL 250
           K +  F  I CS  EQGL+PRP   PKPSK+++  +    + +T +  S+ G+ +QIEKL
Sbjct: 47  KYRNSFCWIKCSSFEQGLRPRPRPQPKPSKLDVGDRKETPLKETHVKKSSVGICSQIEKL 106

Query: 249 VVLKRYKEALELFEILECEGDHDVGISTYDALVNACIGLRSVKGVKRVFSYMIKSDFEPD 70
           V+ K+Y++ALE+FEI E E    VG STYDAL+NACIGL+S++GVKR+ +YM+ + FEPD
Sbjct: 107 VLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPD 166

Query: 69  QYLRNRMLLMHVRCNMMIDA 10
           QY+RNR+LLMHV+C MMIDA
Sbjct: 167 QYMRNRVLLMHVKCGMMIDA 186


>ref|XP_002511191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550306|gb|EEF51793.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  157 bits (397), Expect = 9e-37
 Identities = 77/139 (55%), Positives = 105/139 (75%)
 Frame = -3

Query: 423 KLKIPFFQIGCSYVEQGLKPRPVPKPSKIELEVKTIDHVDKTRIGSSTSGLAAQIEKLVV 244
           K + PF    C  +++GL+PRP PKPSK++++V+   +   TRI   ++ + +QIEKLV+
Sbjct: 87  KWRNPFAINQCCSLDRGLQPRPKPKPSKVDIDVEEGTNFKDTRIKKPSARICSQIEKLVL 146

Query: 243 LKRYKEALELFEILECEGDHDVGISTYDALVNACIGLRSVKGVKRVFSYMIKSDFEPDQY 64
             +Y+EALELFEILE +G  DVG STYDALV+ACIGLRS+ GVKRV +YM+ + FEPDQY
Sbjct: 147 HGKYREALELFEILELDGGFDVGSSTYDALVSACIGLRSIPGVKRVLNYMLSNGFEPDQY 206

Query: 63  LRNRMLLMHVRCNMMIDAR 7
           + NR+LL+ V+C MMI AR
Sbjct: 207 MANRVLLVQVKCGMMIHAR 225