BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038486
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258...   172   3e-41
emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]   172   3e-41
sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-c...   162   2e-38
ref|NP_189042.4| pentatricopeptide repeat-containing protein [Ar...   162   2e-38
ref|XP_002885623.1| pentatricopeptide repeat-containing protein ...   162   3e-38

>ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLL 181
           GALEQGKW+HAHM+KSGLKL  + G+TLLDMYAK+G+  DA +VF RLVK +VVSWN++L
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 182 TACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEFYFDLMK 346
           T CAQHG G E +  F++MLRIGI PN I+FLCVLTACSH+GLL++G +YF+LMK
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK 418



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/107 (36%), Positives = 61/107 (57%)
 Frame = +2

Query: 8   LEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTA 187
           L+ G  +HA  +K G + + Y G  L+DMYA+ G+   A   F  +  ++ VSWN+L++ 
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 188 CAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEF 328
            A+ G G  A+    KM R   +P   T+  VL+AC+  G LEQG++
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKW 311



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSG-LKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSL 178
           G +EQG+ +HAH++ S  L       + +++MYAK G   DA ++F  +  +++V+W +L
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160

Query: 179 LTACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQG 322
           +   +Q+ R  +A+  F +MLR+G +PN  T   +L A      L+ G
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPG 208


>emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/115 (68%), Positives = 98/115 (85%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLL 181
           GALEQGKW+HAHM+KSGLKL  + G+TLLDMYAK+G+  DA +VF RLVK +VVSWN++L
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 182 TACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEFYFDLMK 346
           T CAQHG G E +  F++MLRIGI PN I+FLCVLTACSH+GLL++G +YF+LMK
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK 418



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/107 (35%), Positives = 60/107 (56%)
 Frame = +2

Query: 8   LEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTA 187
           L+ G  +HA  +K G + + Y G  L+DMYA+ G+   A   F  +  ++ VSWN+L++ 
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 188 CAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEF 328
            A+ G G  A+    KM R   +P   T+  V +AC+  G LEQG++
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKW 311



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSG-LKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSL 178
           G +EQG+ +HAH++ S  L       + +++MYAK G   DA ++F  +  +++V+W +L
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160

Query: 179 LTACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQG 322
           +   +Q+ R  +A+  F +MLR+G++PN  T   +L A      L+ G
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPG 208


>sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
           gi|9294669|dbj|BAB03018.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 633

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLL 181
           G LEQGKW+HA+M+KSG KL  +AG+TLLDMYAKSG+  DA K+F RL KR+VVSWNSLL
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335

Query: 182 TACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEFYFDLMK 346
           TA AQHG G EA+  F++M R+GIRPN I+FL VLTACSH+GLL++G  Y++LMK
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/97 (39%), Positives = 62/97 (63%)
 Frame = +2

Query: 8   LEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTA 187
           L QG+ +HAH+++S  +     G+TLL+MYAK G+  +A KVF ++ +R+ V+W +L++ 
Sbjct: 76  LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 188 CAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACS 298
            +QH R  +A+  F +MLR G  PN  T   V+ A +
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/104 (37%), Positives = 57/104 (54%)
 Frame = +2

Query: 17  GKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTACAQ 196
           G  +H   +K G     + G  LLD+Y + G   DA  VF  L  RN VSWN+L+   A+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239

Query: 197 HGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEF 328
                +A++ F+ MLR G RP+  ++  +  ACS  G LEQG++
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283


>ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332643322|gb|AEE76843.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLL 181
           G LEQGKW+HA+M+KSG KL  +AG+TLLDMYAKSG+  DA K+F RL KR+VVSWNSLL
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335

Query: 182 TACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEFYFDLMK 346
           TA AQHG G EA+  F++M R+GIRPN I+FL VLTACSH+GLL++G  Y++LMK
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/97 (39%), Positives = 62/97 (63%)
 Frame = +2

Query: 8   LEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTA 187
           L QG+ +HAH+++S  +     G+TLL+MYAK G+  +A KVF ++ +R+ V+W +L++ 
Sbjct: 76  LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135

Query: 188 CAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACS 298
            +QH R  +A+  F +MLR G  PN  T   V+ A +
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/104 (37%), Positives = 57/104 (54%)
 Frame = +2

Query: 17  GKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTACAQ 196
           G  +H   +K G     + G  LLD+Y + G   DA  VF  L  RN VSWN+L+   A+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239

Query: 197 HGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEF 328
                +A++ F+ MLR G RP+  ++  +  ACS  G LEQG++
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283


>ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331463|gb|EFH61882.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/115 (68%), Positives = 96/115 (83%)
 Frame = +2

Query: 2   GALEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLL 181
           G LEQGKW+HA+M+KSG KL  +AG+TLLDMYAKSG+  DA K+F RL KR+VVSWNSLL
Sbjct: 267 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 326

Query: 182 TACAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEFYFDLMK 346
           TA AQHG GNEA+  F++M R GIRPN I+FL VLTACSH+GLL++G  Y++LMK
Sbjct: 327 TAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 381



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/97 (37%), Positives = 60/97 (61%)
 Frame = +2

Query: 8   LEQGKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTA 187
           L QG+ +H H+++S  +      +TLL+MYAK G+  +A KVF ++ +R+ V+W +L++ 
Sbjct: 67  LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126

Query: 188 CAQHGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACS 298
            +QH R  +A+  F +MLR G  PN  T   V+ A +
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAA 163



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/104 (37%), Positives = 57/104 (54%)
 Frame = +2

Query: 17  GKWIHAHMMKSGLKLTGYAGHTLLDMYAKSGNFMDAIKVFYRLVKRNVVSWNSLLTACAQ 196
           G  +H   +K G     + G  LLD+Y + G   DA  VF  L  RN VSWN+L+   A+
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230

Query: 197 HGRGNEAIKHFKKMLRIGIRPNAITFLCVLTACSHAGLLEQGEF 328
                +A++ F+ MLR G RP+  ++  +  ACS  G LEQG++
Sbjct: 231 RCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKW 274