BLASTX nr result

ID: Bupleurum21_contig00038452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038452
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631895.1| PREDICTED: transformation/transcription doma...   100   9e-20
emb|CAN69918.1| hypothetical protein VITISV_044430 [Vitis vinifera]   100   9e-20
ref|XP_002867036.1| FAT domain-containing protein [Arabidopsis l...    95   7e-18
ref|NP_001190934.1| transformation/transcription domain-associat...    94   1e-17
ref|NP_001190933.1| transformation/transcription domain-associat...    94   1e-17

>ref|XP_003631895.1| PREDICTED: transformation/transcription domain-associated protein
           [Vitis vinifera]
          Length = 3906

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 5/109 (4%)
 Frame = -3

Query: 331 IKDLKKLTLHVLTTDNEENGLICINILFDLFKYYRPTSEDVVQTFLDFVSTIYQNFRLTV 152
           ++DL K+ + VLTTDNEENGLICI I+FDL + +RPT E+ VQ FLDFV  IYQNFRLTV
Sbjct: 95  VQDLLKVAMQVLTTDNEENGLICIRIIFDLLRNFRPTLENEVQPFLDFVCKIYQNFRLTV 154

Query: 151 TRFFGSGVVPPLP-----PVTMLYGXXXXXXXXXSIEDVRSLTRDMSDQ 20
           + FF +G   P+P     PV++  G           EDV+ +  D+SDQ
Sbjct: 155 SHFFENGAAVPVPVPVPVPVSVPVGG----------EDVKPM--DVSDQ 191


>emb|CAN69918.1| hypothetical protein VITISV_044430 [Vitis vinifera]
          Length = 303

 Score =  100 bits (250), Expect = 9e-20
 Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 5/109 (4%)
 Frame = -3

Query: 331 IKDLKKLTLHVLTTDNEENGLICINILFDLFKYYRPTSEDVVQTFLDFVSTIYQNFRLTV 152
           ++DL K+ + VLTTDNEENGLICI I+FDL + +RPT E+ VQ FLDFV  IYQNFRLTV
Sbjct: 69  VQDLLKVAMQVLTTDNEENGLICIRIIFDLLRNFRPTLENEVQPFLDFVCKIYQNFRLTV 128

Query: 151 TRFFGSGVVPPLP-----PVTMLYGXXXXXXXXXSIEDVRSLTRDMSDQ 20
           + FF +G   P+P     PV++  G           EDV+ +  D+SDQ
Sbjct: 129 SHFFENGAAVPVPVPVPVPVSVPVGG----------EDVKPM--DVSDQ 165


>ref|XP_002867036.1| FAT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312872|gb|EFH43295.1| FAT domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 3838

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = -3

Query: 331 IKDLKKLTLHVLTTDNEENGLICINILFDLFKYYRPTSEDVVQTFLDFVSTIYQNFRLTV 152
           ++DL K+ + VLTTDNEENGLICI I+FDL + +RPT E+ VQ FLDFV  IYQNFRLTV
Sbjct: 95  VQDLLKVAMQVLTTDNEENGLICIRIIFDLLRNFRPTLENEVQPFLDFVCKIYQNFRLTV 154

Query: 151 TRFFGSGVVPPLPPV 107
           + FF +  +  + PV
Sbjct: 155 SHFFENVKIEEVKPV 169


>ref|NP_001190934.1| transformation/transcription domain-associated protein [Arabidopsis
           thaliana] gi|332661214|gb|AEE86614.1|
           transformation/transcription domain-associated protein
           [Arabidopsis thaliana]
          Length = 3809

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = -3

Query: 331 IKDLKKLTLHVLTTDNEENGLICINILFDLFKYYRPTSEDVVQTFLDFVSTIYQNFRLTV 152
           ++DL K+ + VLTTDNEENGLICI I+FDL + +RPT E+ VQ FLDFV  IYQNFRLTV
Sbjct: 95  VQDLLKVAMQVLTTDNEENGLICIRIIFDLLRNFRPTLENEVQPFLDFVCKIYQNFRLTV 154

Query: 151 TRFFGSGVVPPLPPV 107
           + FF +  +  + PV
Sbjct: 155 SHFFENVKMEEVKPV 169


>ref|NP_001190933.1| transformation/transcription domain-associated protein [Arabidopsis
           thaliana] gi|332661213|gb|AEE86613.1|
           transformation/transcription domain-associated protein
           [Arabidopsis thaliana]
          Length = 3804

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = -3

Query: 331 IKDLKKLTLHVLTTDNEENGLICINILFDLFKYYRPTSEDVVQTFLDFVSTIYQNFRLTV 152
           ++DL K+ + VLTTDNEENGLICI I+FDL + +RPT E+ VQ FLDFV  IYQNFRLTV
Sbjct: 95  VQDLLKVAMQVLTTDNEENGLICIRIIFDLLRNFRPTLENEVQPFLDFVCKIYQNFRLTV 154

Query: 151 TRFFGSGVVPPLPPV 107
           + FF +  +  + PV
Sbjct: 155 SHFFENVKMEEVKPV 169


Top