BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038449
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   117   1e-24
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   116   2e-24
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   116   2e-24
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   113   1e-23
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   113   2e-23

>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  117 bits (292), Expect = 1e-24
 Identities = 51/100 (51%), Positives = 76/100 (76%)
 Frame = -3

Query: 306 RCMIKLDIQKAFDTLNWKFLLSSLRAMNFPAMFIAWVEKCISSCKFSVKVNGALEGFFPA 127
           R M+K+D++KAFD++ W+F++++L A+  P  FI W+ +CIS+  F+V VNG   GFF +
Sbjct: 565 RGMLKVDLRKAFDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKS 624

Query: 126 ASGVRQGDPMSPYLFVLAMEVFTSCINAAKNAGNFRHHWK 7
           A G+RQGDP+SPYLFVLAMEVF+  +N+  ++G  R+H K
Sbjct: 625 AKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPK 664


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/100 (52%), Positives = 75/100 (75%)
 Frame = -3

Query: 306 RCMIKLDIQKAFDTLNWKFLLSSLRAMNFPAMFIAWVEKCISSCKFSVKVNGALEGFFPA 127
           R M+K+D++KAFD++ W F++S+ RA+  P  F+ W+ +CIS+  FSV VNG+  GFF +
Sbjct: 588 RGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKS 647

Query: 126 ASGVRQGDPMSPYLFVLAMEVFTSCINAAKNAGNFRHHWK 7
             G+RQGDP+SPYLFVLAMEVF+S + A  +AG  ++H K
Sbjct: 648 NKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPK 687


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/100 (52%), Positives = 74/100 (74%)
 Frame = -3

Query: 306 RCMIKLDIQKAFDTLNWKFLLSSLRAMNFPAMFIAWVEKCISSCKFSVKVNGALEGFFPA 127
           R M+K+D++KAFD++ W F++S+ RA+  P  F+ W+ +CIS+  FSV VNG+  GFF +
Sbjct: 588 RGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKS 647

Query: 126 ASGVRQGDPMSPYLFVLAMEVFTSCINAAKNAGNFRHHWK 7
             G+RQGDP+SPYLFVLAMEVF+S + A  +AG   +H K
Sbjct: 648 NKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPK 687


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/99 (50%), Positives = 71/99 (71%)
 Frame = -3

Query: 297 IKLDIQKAFDTLNWKFLLSSLRAMNFPAMFIAWVEKCISSCKFSVKVNGALEGFFPAASG 118
           +K+DI KAFD+L W FL+++L AMNFP  FI W+ +CI++  FSV+VNG L G+F +A G
Sbjct: 1   MKIDISKAFDSLQWSFLINALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARG 60

Query: 117 VRQGDPMSPYLFVLAMEVFTSCINAAKNAGNFRHHWKCQ 1
           +RQG  +SPYLFV++MEV +  ++ A     F  H KC+
Sbjct: 61  IRQGCALSPYLFVISMEVLSKMLDQAAGGKRFGFHPKCK 99


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/102 (49%), Positives = 71/102 (69%)
 Frame = -3

Query: 306 RCMIKLDIQKAFDTLNWKFLLSSLRAMNFPAMFIAWVEKCISSCKFSVKVNGALEGFFPA 127
           RC +K+DI KAFD+L W FL   L AMNFP  FI W+  C+S+  FS++VNG L G+F +
Sbjct: 314 RCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRS 373

Query: 126 ASGVRQGDPMSPYLFVLAMEVFTSCINAAKNAGNFRHHWKCQ 1
           A G+RQG  +SPYLFV++M+V +  ++ A  A  F +H +C+
Sbjct: 374 ARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCK 415