BLASTX nr result

ID: Bupleurum21_contig00038448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038448
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27584.3| unnamed protein product [Vitis vinifera]               74   7e-27
emb|CAN83106.1| hypothetical protein VITISV_041822 [Vitis vinifera]    72   2e-25
emb|CBI27589.3| unnamed protein product [Vitis vinifera]               73   3e-25
ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-25
ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-l...    73   1e-24

>emb|CBI27584.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 73.9 bits (180), Expect(2) = 7e-27
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   SSCGDERIIIFTTNNKDKLDPALLRPGRMDKHIHMSF 113
           SSCG+ERII+FTTN+KDKLDPALLRPGRMD HIHMSF
Sbjct: 311 SSCGNERIIVFTTNHKDKLDPALLRPGRMDVHIHMSF 347



 Score = 71.6 bits (174), Expect(2) = 7e-27
 Identities = 41/84 (48%), Positives = 55/84 (65%)
 Frame = +1

Query: 127 GFKTLASTYLDIKDQHWRFREIDELLLGSVEVTPAEVAEELTKTTDADECLGGLVNFLKG 306
           GFKTLAS YLD+ + H  F EI++LL+  VEVTPAE+AEE  K+ DAD  L GLV FL+ 
Sbjct: 352 GFKTLASNYLDVSN-HKLFPEIEKLLM-EVEVTPAEIAEEFMKSEDADVALEGLVEFLRR 409

Query: 307 KKRGRSVEDNSDEIQLIPEAKRIK 378
            K  R+  D  D  + + ++  +K
Sbjct: 410 VKMIRNGSDGRDGKEFVLKSSHVK 433


>emb|CAN83106.1| hypothetical protein VITISV_041822 [Vitis vinifera]
          Length = 469

 Score = 72.0 bits (175), Expect(2) = 2e-25
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +3

Query: 3   SSCGDERIIIFTTNNKDKLDPALLRPGRMDKHIHMSFLSVKRIQNISF 146
           SSCG+ERII+FTTN+KDKLDPALLRPG MD HIHMS+ +    + ++F
Sbjct: 333 SSCGNERIIVFTTNHKDKLDPALLRPGHMDVHIHMSYCNPCGFKTLAF 380



 Score = 68.9 bits (167), Expect(2) = 2e-25
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = +1

Query: 127 GFKTLASTYLDIKDQHWRFREIDELLLGSVEVTPAEVAEELTKTTDADECLGGLVNFLKG 306
           GFKTLA  YLDI + H  F EI++LL+  VEVTPAE+AEE  K+ DAD  L GLV FL+ 
Sbjct: 374 GFKTLAFNYLDISN-HKLFPEIEKLLM-EVEVTPAEIAEEFMKSEDADVALEGLVEFLRR 431

Query: 307 KKRGRSVEDNSDEIQLIPEA-KRIKTN 384
            K  R+  D     + + E+  ++KTN
Sbjct: 432 VKMVRNGSDGRQGKEEVAESGNQVKTN 458


>emb|CBI27589.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 73.2 bits (178), Expect(2) = 3e-25
 Identities = 31/37 (83%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   SSCGDERIIIFTTNNKDKLDPALLRPGRMDKHIHMSF 113
           SSCGDERII+FTTN+KD++DPALLRPGRMD HIHMS+
Sbjct: 325 SSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIHMSY 361



 Score = 67.0 bits (162), Expect(2) = 3e-25
 Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 14/101 (13%)
 Frame = +1

Query: 127 GFKTLASTYLDIKDQHWRFREIDELLLGSVEVTPAEVAEELTKTTDADECLGGLVNFLKG 306
           GFKTLAS YL + + H  F EI+ L+   VEVTPAE+AEEL K+ +AD  L GL+ FLK 
Sbjct: 366 GFKTLASNYLGVSN-HRLFTEIERLIT-EVEVTPAEIAEELMKSEEADVALEGLIAFLKR 423

Query: 307 KK--------RGRSVEDNSDEIQ------LIPEAKRIKTNG 387
            K        RG+ V++   E Q       + EAKR K +G
Sbjct: 424 AKSAENKSNCRGKKVDEQGIERQDVVQSGKVVEAKRQKMSG 464


>ref|XP_002312632.1| predicted protein [Populus trichocarpa] gi|222852452|gb|EEE89999.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 73.9 bits (180), Expect(2) = 6e-25
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = +3

Query: 3   SSCGDERIIIFTTNNKDKLDPALLRPGRMDKHIHMSF 113
           SSCGDERII+FTTN KDKLDPALLRPGRMD HIHMS+
Sbjct: 333 SSCGDERIIVFTTNYKDKLDPALLRPGRMDMHIHMSY 369



 Score = 65.1 bits (157), Expect(2) = 6e-25
 Identities = 36/73 (49%), Positives = 49/73 (67%)
 Frame = +1

Query: 127 GFKTLASTYLDIKDQHWRFREIDELLLGSVEVTPAEVAEELTKTTDADECLGGLVNFLKG 306
           GFK LAS YL++K+ H  F +I+EL++  VEVTPAEVAEEL K  D D  L G++ FL+ 
Sbjct: 374 GFKILASNYLNVKN-HSLFSQIEELIM-EVEVTPAEVAEELMKNEDVDTALTGIIGFLER 431

Query: 307 KKRGRSVEDNSDE 345
           KK  +  +   +E
Sbjct: 432 KKGMKRKQSGVEE 444


>ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-like [Vitis vinifera]
          Length = 543

 Score = 73.2 bits (178), Expect(2) = 1e-24
 Identities = 31/37 (83%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   SSCGDERIIIFTTNNKDKLDPALLRPGRMDKHIHMSF 113
           SSCGDERII+FTTN+KD++DPALLRPGRMD HIHMS+
Sbjct: 397 SSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIHMSY 433



 Score = 65.1 bits (157), Expect(2) = 1e-24
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
 Frame = +1

Query: 127 GFKTLASTYLDIKDQHWRFREIDELLLGSVEVTPAEVAEELTKTTDADECLGGLVNFLKG 306
           GFKTLAS YL + + H  F EI+ L+   VEVTPAE+AEEL K+ +AD  L GL+ FLK 
Sbjct: 438 GFKTLASNYLGVSN-HRLFTEIERLIT-EVEVTPAEIAEELMKSEEADVALEGLIEFLKR 495

Query: 307 KK--------RGRSVEDNSDEIQLIPEAKRI 375
            K         G+ V++   E + + E++++
Sbjct: 496 AKIAENKSNGEGKEVDEQGTERRDVVESEKV 526


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