BLASTX nr result

ID: Bupleurum21_contig00038447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038447
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539117.1| PREDICTED: transcription regulatory protein ...   101   7e-20
ref|XP_002517204.1| ATP binding protein, putative [Ricinus commu...   101   7e-20
ref|XP_003555334.1| PREDICTED: transcription regulatory protein ...   100   1e-19
ref|XP_003535660.1| PREDICTED: transcription regulatory protein ...   100   1e-19
ref|XP_003592449.1| Chromatin remodeling complex subunit [Medica...   100   2e-19

>ref|XP_003539117.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1063

 Score =  101 bits (251), Expect = 7e-20
 Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 17/101 (16%)
 Frame = +3

Query: 12  SLRELWSLLYFVVPEIFSSVENFEVWFNALFAGHFETSL--------IRHLQHVMRSFIL 167
           SL+ELWSLL F++P IF+SV+NFE WFNA FA   + SL        IR L  V+R FIL
Sbjct: 535 SLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFIL 594

Query: 168 TRTKEEVEH---------QKCDISAGQKVYYQQVTDAGRVG 263
            R K+EVE           KCD+SA QKVYYQQVTD GRVG
Sbjct: 595 RRKKDEVEKFLPSKSQVILKCDLSAWQKVYYQQVTDVGRVG 635


>ref|XP_002517204.1| ATP binding protein, putative [Ricinus communis]
           gi|223543839|gb|EEF45367.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1079

 Score =  101 bits (251), Expect = 7e-20
 Identities = 57/104 (54%), Positives = 67/104 (64%), Gaps = 17/104 (16%)
 Frame = +3

Query: 12  SLRELWSLLYFVVPEIFSSVENFEVWFNALFAGHFETSL--------IRHLQHVMRSFIL 167
           SL+ELWSLL F++P IF+SV+NFE WFNA FA     +L        IR L HV+R FIL
Sbjct: 488 SLQELWSLLNFLLPNIFNSVQNFEEWFNAPFADRCHVALTDEEELLIIRRLHHVIRPFIL 547

Query: 168 TRTKEEVEHQ---------KCDISAGQKVYYQQVTDAGRVGPST 272
            R K+EVE           KCD+SA QKVYYQQVT+ GRVG  T
Sbjct: 548 RRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTEIGRVGLQT 591


>ref|XP_003555334.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1073

 Score =  100 bits (250), Expect = 1e-19
 Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 17/101 (16%)
 Frame = +3

Query: 12  SLRELWSLLYFVVPEIFSSVENFEVWFNALFAGHFETSL--------IRHLQHVMRSFIL 167
           SL+ELWSLL F++P IF+SV+NFE WFNA FA   + SL        IR L  V+R FIL
Sbjct: 536 SLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFIL 595

Query: 168 TRTKEEVEH---------QKCDISAGQKVYYQQVTDAGRVG 263
            R K+EVE           KCD+SA QKVYYQQVTD GRVG
Sbjct: 596 RRKKDEVEKFLPVKSQVILKCDMSAWQKVYYQQVTDVGRVG 636


>ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1072

 Score =  100 bits (250), Expect = 1e-19
 Identities = 57/101 (56%), Positives = 66/101 (65%), Gaps = 17/101 (16%)
 Frame = +3

Query: 12  SLRELWSLLYFVVPEIFSSVENFEVWFNALFAGHFETSL--------IRHLQHVMRSFIL 167
           SL+ELWSLL F++P IF+SV+NFE WFNA FA   + SL        IR L  V+R FIL
Sbjct: 534 SLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFIL 593

Query: 168 TRTKEEVEH---------QKCDISAGQKVYYQQVTDAGRVG 263
            R K+EVE           KCD+SA QKVYYQQVTD GRVG
Sbjct: 594 RRKKDEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVG 634


>ref|XP_003592449.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355481497|gb|AES62700.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1083

 Score =  100 bits (248), Expect = 2e-19
 Identities = 57/101 (56%), Positives = 65/101 (64%), Gaps = 17/101 (16%)
 Frame = +3

Query: 12  SLRELWSLLYFVVPEIFSSVENFEVWFNALFAGHFETSL--------IRHLQHVMRSFIL 167
           SL+ELWSLL F++P IF+SV+NFE WFNA FA   + SL        IR L  V+R FIL
Sbjct: 540 SLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLSDEEQLLIIRRLHQVIRPFIL 599

Query: 168 TRTKEEVEH---------QKCDISAGQKVYYQQVTDAGRVG 263
            R K EVE           KCD+SA QKVYYQQVTD GRVG
Sbjct: 600 RRKKNEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVG 640


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