BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038441
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi...   177   1e-42
emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]   177   1e-42
ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,...   143   1e-32
ref|XP_002878376.1| pentatricopeptide repeat-containing protein ...   137   1e-30

>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
           [Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
           protein product [Vitis vinifera]
          Length = 513

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/143 (60%), Positives = 109/143 (76%)
 Frame = -3

Query: 430 LTKSNRANQILQLFHKNKLFLTVAFKSTSQPDSSPETDSLVEKLTKIINDNPYPDKPLLP 251
           L ++ R+NQ  Q+  K  LFL +AFKS+ Q   S E  S ++++T+IIND+P+PD PL  
Sbjct: 3   LLRTKRSNQPYQIPQKLTLFLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHS 62

Query: 250 VLSQQIPPTALSTSIVENVLGRLFAAHANGLKASEFFRYTLQASHLCPSADAFEKTLHIL 71
            L Q +P   LS + VENVLGRLFAAH+NG KA EFF+++LQ S  CPS+DAFEKTLHIL
Sbjct: 63  TLIQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHIL 122

Query: 70  TRMRYFDKAWQLMEEIRKKHPSL 2
           TRMRYFDKAW+LMEEI++ HPSL
Sbjct: 123 TRMRYFDKAWELMEEIQQTHPSL 145


>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
          Length = 515

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/143 (60%), Positives = 109/143 (76%)
 Frame = -3

Query: 430 LTKSNRANQILQLFHKNKLFLTVAFKSTSQPDSSPETDSLVEKLTKIINDNPYPDKPLLP 251
           L ++ R+NQ  Q+  K  LFL +AFKS+ Q   S E  S ++++T+IIND+P+PD PL  
Sbjct: 3   LLRTKRSNQPYQIPQKLTLFLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPLHS 62

Query: 250 VLSQQIPPTALSTSIVENVLGRLFAAHANGLKASEFFRYTLQASHLCPSADAFEKTLHIL 71
            L Q +P   LS + VENVLGRLFAAH+NG KA EFF+++LQ S  CPS+DAFEKTLHIL
Sbjct: 63  TLIQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHIL 122

Query: 70  TRMRYFDKAWQLMEEIRKKHPSL 2
           TRMRYFDKAW+LMEEI++ HPSL
Sbjct: 123 TRMRYFDKAWELMEEIQQTHPSL 145


>ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|222834094|gb|EEE72571.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  150 bits (379), Expect = 1e-34
 Identities = 82/148 (55%), Positives = 102/148 (68%), Gaps = 1/148 (0%)
 Frame = -3

Query: 442 TMLSLTKSNRANQILQLFHKNKLFLTVAFKSTSQPDSSPETDSLVEKLTKIINDNPYPDK 263
           ++LSL K++  N  L    K    L VA   T+    S E    VE++ +IIND+P+P++
Sbjct: 3   SLLSLKKTHSTNHHLFQIPKR---LFVALSPTATSTQSIE----VERIARIINDHPFPNQ 55

Query: 262 PLLPVLSQQIPPTALSTSIVENVLGRLFAAHANGLKASEFFRYTL-QASHLCPSADAFEK 86
           PL P L+  IPPT L+T+ VENVLGRLFAAH+NGLKA EFF+Y+L   +H  PS D+FEK
Sbjct: 56  PLHPTLTHHIPPTLLTTAFVENVLGRLFAAHSNGLKALEFFKYSLNNQTHFSPSPDSFEK 115

Query: 85  TLHILTRMRYFDKAWQLMEEIRKKHPSL 2
           TLHIL RMRYFDKAW LM EI K HP L
Sbjct: 116 TLHILARMRYFDKAWDLMVEIGKTHPFL 143


>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/105 (66%), Positives = 84/105 (80%)
 Frame = -3

Query: 316 SLVEKLTKIINDNPYPDKPLLPVLSQQIPPTALSTSIVENVLGRLFAAHANGLKASEFFR 137
           S VE++TKIINDN +P++ L P L + + P ALST  VENVLGRLFAAH+NGLKA EFFR
Sbjct: 58  SEVERITKIINDNSFPNESLYPTLLKHLNPAALSTDFVENVLGRLFAAHSNGLKALEFFR 117

Query: 136 YTLQASHLCPSADAFEKTLHILTRMRYFDKAWQLMEEIRKKHPSL 2
           ++L+ SH  PS+ AFE TLHIL RMRYF+KAW+LM EI K HPSL
Sbjct: 118 FSLRHSHFNPSSFAFEMTLHILARMRYFEKAWELMMEIGKSHPSL 162


>ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324214|gb|EFH54635.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 498

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/123 (52%), Positives = 90/123 (73%)
 Frame = -3

Query: 370 LTVAFKSTSQPDSSPETDSLVEKLTKIINDNPYPDKPLLPVLSQQIPPTALSTSIVENVL 191
           L     S+S   S+    + +E +T+IIND+P+P+ P+ P+ ++ IP ++LS   V  VL
Sbjct: 14  LAPVLSSSSSLSSTSRNRTEIELITRIINDHPFPNHPIQPIFTKHIPLSSLSPEFVSEVL 73

Query: 190 GRLFAAHANGLKASEFFRYTLQASHLCPSADAFEKTLHILTRMRYFDKAWQLMEEIRKKH 11
           G LFAAH+NGLKA EFF+Y+L++S+  P++D+FEKTLHIL RMRYFD+AW LM EIRK +
Sbjct: 74  GSLFAAHSNGLKALEFFKYSLKSSNSSPTSDSFEKTLHILARMRYFDQAWALMAEIRKDY 133

Query: 10  PSL 2
           P L
Sbjct: 134 PDL 136