BLASTX nr result
ID: Bupleurum21_contig00038424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00038424
(366 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 141 6e-32
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 139 3e-31
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat... 129 2e-28
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 141 bits (355), Expect = 6e-32
Identities = 67/118 (56%), Positives = 88/118 (74%)
Frame = +1
Query: 13 HTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKALMT 192
HTT+TYNTM+ IAG +K+F L+E+L EM E C+ DI+T+TILISHYG K+IGKAL+
Sbjct: 203 HTTRTYNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLIGKALLI 262
Query: 193 YENMRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
E M G +PD Y +++R+LCNA KADIA+EFYKEM Q M D+ L++L+L CL
Sbjct: 263 LEKMWKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQKEMGLDMSLYELLLTCL 320
Score = 70.5 bits (171), Expect = 1e-10
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
++HTT+TYN + I+G SK F + L EMR + T+TI+I YG + AL
Sbjct: 693 YSHTTETYNMGIKISGCSKNFRSMRNLFFEMRRKGHPVTPDTWTIMIMQYGRAGLTEIAL 752
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALC--NAGKADIAMEFYKEMKQDNMEPDIGLFKLVLK 360
+ M+ +P+ YK ++ LC K D A++ + EM + PD L + LK
Sbjct: 753 RNFAEMKANDCKPNGSTYKYLIICLCGRKGRKVDEAIKTFLEMIRAGYVPDKELVESYLK 812
Query: 361 CL 366
CL
Sbjct: 813 CL 814
>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 140 bits (352), Expect = 1e-31
Identities = 63/120 (52%), Positives = 90/120 (75%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
F HTT+TYNTM+ AG +++F +++ L EEM + SCE DI+T+TILI YG K++GKAL
Sbjct: 200 FCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKAL 259
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
+ +E MR G +PD VY++ L +LC+AGK +IA+E YKEM Q MEP++ L+K++L CL
Sbjct: 260 LVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCL 319
Score = 64.3 bits (155), Expect = 1e-08
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
F TT+TYN M ++G K F+ + L EMR + T+ I+I YG + AL
Sbjct: 692 FCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIAL 751
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALC--NAGKADIAMEFYKEMKQDNMEPDIGLFKLVLK 360
+ M+ G P+ YK ++ LC K D A++ ++EM + PD L L
Sbjct: 752 KIFGEMKASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLC 811
Query: 361 CL 366
CL
Sbjct: 812 CL 813
>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 140 bits (352), Expect = 1e-31
Identities = 64/120 (53%), Positives = 90/120 (75%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
F HTT+TYNTM+ AG +++F +++ L EEM + SCE DI+T+TILI YG K+IGKAL
Sbjct: 200 FCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKAL 259
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
+ +E MR G +PD VY++ L +LC+AGK +IA+E YKEM Q MEP++ L+K++L CL
Sbjct: 260 LVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCL 319
Score = 64.3 bits (155), Expect = 1e-08
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
F TT+TYN M ++G K F+ + L EMR + T+ I+I YG + AL
Sbjct: 692 FCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIAL 751
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALC--NAGKADIAMEFYKEMKQDNMEPDIGLFKLVLK 360
+ M+ G P+ YK ++ LC K D A++ ++EM + PD L L
Sbjct: 752 KIFGEMKASGCNPNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLC 811
Query: 361 CL 366
CL
Sbjct: 812 CL 813
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 139 bits (349), Expect = 3e-31
Identities = 61/117 (52%), Positives = 91/117 (77%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
F HTT+TY TM+ IAG +K+F++++ L EEM +NSCE DI+T++ILIS +G K+IGKAL
Sbjct: 206 FCHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGKAKLIGKAL 265
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVL 357
+ +E M+ G +PD +YK+M+ +LCNAGK ++A+ FYKEM Q +M D+ L+K++L
Sbjct: 266 LFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSLYKILL 322
Score = 68.9 bits (167), Expect = 4e-10
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +1
Query: 13 HTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKALMT 192
HT +TYN M I+G K F+ + L EMR C + T+ I+I YG + +L T
Sbjct: 717 HTKETYNMAMKISGREKDFKHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLKT 776
Query: 193 YENMRLYGLQPDPVVYKLMLRALC--NAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
+ M+ G P+ YK +L +LC K D A++ + EM + PD + L CL
Sbjct: 777 FTEMKDNGYIPNDSTYKYLLISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCL 836
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/115 (29%), Positives = 59/115 (51%)
Frame = +1
Query: 10 NHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKALM 189
N T Y +++ KQ E Q+ E+M+++ CE + TY+ LI Y N++ A
Sbjct: 927 NPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWS 986
Query: 190 TYENMRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLV 354
+++L G +PD Y + + LC AGK++ A++ M +D + P F+ V
Sbjct: 987 VLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVPSTINFRTV 1041
Score = 60.1 bits (144), Expect = 2e-07
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +1
Query: 25 TYNTMMN-IAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKALMTYEN 201
TY T+++ + +Q E L ++ E M+E + YT LI H+ K I KA+ +E
Sbjct: 897 TYGTLVHGLLRKGRQEEALAKI-ESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEK 955
Query: 202 MRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
M+ G +P V Y ++R N +AD A +K +PD + + + CL
Sbjct: 956 MQQDGCEPTVVTYSALIRGYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCL 1010
>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 129 bits (324), Expect = 2e-28
Identities = 58/120 (48%), Positives = 89/120 (74%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
F+HTT+TYNTM++IA +K+F L+++L EEM E + D+ T+TI+I+HYG + I +AL
Sbjct: 186 FSHTTRTYNTMLHIAREAKEFGLVKKLVEEMDECGIQKDVNTWTIIINHYGKARKISEAL 245
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
+ +ENM+ G +PD V Y ++ +LC+AGK DIAMEFY EM + +M D+ L+K+V+ C+
Sbjct: 246 LAFENMKRCGCEPDAVSYGAIICSLCSAGKRDIAMEFYNEMVRKDMVLDVRLYKMVMNCM 305
Score = 71.2 bits (173), Expect = 8e-11
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +1
Query: 7 FNHTTQTYNTMMNIAGASKQFELLEQLAEEMRENSCEMDIRTYTILISHYGNVKMIGKAL 186
+ HT ++YN + IAG K F+ + L EMR NS + T+TI+I YG + A+
Sbjct: 677 YRHTAESYNIAIKIAGCGKDFKHMRSLFFEMRRNSYPITSETWTIMIMVYGRTGLTEMAM 736
Query: 187 MTYENMRLYGLQPDPVVYKLMLRALC--NAGKADIAMEFYKEMKQDNMEPDIGLFKLVLK 360
++ M+ P YK ++ ALC K D A++ Y EM PD L + L
Sbjct: 737 NCFKEMKADDYVPSRSTYKYLIIALCGRKGRKVDDALKIYGEMISAGYVPDKELIETYLG 796
Query: 361 CL 366
CL
Sbjct: 797 CL 798
Score = 56.2 bits (134), Expect = 3e-06
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +1
Query: 46 IAGASKQFELLEQLA--EEMRENSCEMDIRTYTILISHYGNVKMIGKALMTYENMRLYGL 219
+ G ++ L E LA + M++N I +T LI H+ K + KA+ T+E M G
Sbjct: 864 VHGLLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIVHFFKEKQVEKAIETFEEMLHSGY 923
Query: 220 QPDPVVYKLMLRALCNAGKADIAMEFYKEMKQDNMEPDIGLFKLVLKCL 366
+P V Y ++R N G+ A + + MK PD + + L CL
Sbjct: 924 EPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLKGPFPDFKTYSMFLTCL 972