BLASTX nr result

ID: Bupleurum21_contig00038410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038410
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV51939.1| SBP transcription factor [Gossypium hirsutum]           69   5e-10
ref|XP_002533086.1| Squamosa promoter-binding protein, putative ...    67   1e-09
ref|XP_003526029.1| PREDICTED: squamosa promoter-binding protein...    67   2e-09
ref|XP_003540122.1| PREDICTED: squamosa promoter-binding protein...    66   3e-09
gb|AFK42236.1| unknown [Medicago truncatula]                           65   4e-09

>gb|AAV51939.1| SBP transcription factor [Gossypium hirsutum]
          Length = 169

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = -3

Query: 214 EEEYGVA-DLVF---EKERSGKKKKAVSTATYGTVSPPRCQVESCLVDLSNEMRYYRRHK 47
           EEE GV  D  F   EK++ G  ++  +    G VSPP CQVE C +DLS+  RY+RRHK
Sbjct: 4   EEEEGVGGDHGFPDDEKKKKGYGRRGAAGGG-GGVSPPACQVEKCGLDLSDAKRYHRRHK 62

Query: 46  VCQLHAKALVVIVAG 2
           VC++HAKA  V+VAG
Sbjct: 63  VCEIHAKAPFVVVAG 77


>ref|XP_002533086.1| Squamosa promoter-binding protein, putative [Ricinus communis]
           gi|223527125|gb|EEF29301.1| Squamosa promoter-binding
           protein, putative [Ricinus communis]
          Length = 198

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = -3

Query: 214 EEEYGVADLVF---EKERSGKKKKAVSTATYGTVSPPRCQVESCLVDLSNEMRYYRRHKV 44
           EEE G + + F   EK++    KK  ++   G  SPP CQVE C  DL++  RY+RRHKV
Sbjct: 35  EEESGGSGVGFLDDEKKKVLHAKKGGTSGGGGGGSPPSCQVERCGADLTDAKRYHRRHKV 94

Query: 43  CQLHAKALVVIVAG 2
           C++HAKA  V+VAG
Sbjct: 95  CEIHAKAPAVVVAG 108


>ref|XP_003526029.1| PREDICTED: squamosa promoter-binding protein 1-like [Glycine max]
          Length = 185

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
 Frame = -3

Query: 220 EGEEEYGVADLVFEKER----SGKKKKAVSTATYGTVSPPRCQVESCLVDLSNEMRYYRR 53
           E E+E GV+    EK++    SG ++   S+   G VSPP CQ E C  DL++  RY+RR
Sbjct: 26  EEEDESGVSITEEEKKKGVGSSGGRRG--SSGGSGGVSPPSCQAERCGADLTDAKRYHRR 83

Query: 52  HKVCQLHAKALVVIVAG 2
           HKVC+ H+KA VV+VAG
Sbjct: 84  HKVCEFHSKAPVVVVAG 100


>ref|XP_003540122.1| PREDICTED: squamosa promoter-binding protein 1-like [Glycine max]
          Length = 190

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = -3

Query: 220 EGEEEYGVADLVFEKER-----SGKKKKAVSTATYGTVSPPRCQVESCLVDLSNEMRYYR 56
           EGEEE      + E+E+     SG  ++  S+   G VSPP CQ E C  DL++  RY+R
Sbjct: 29  EGEEEDESGVNITEEEKKIGVSSGGGRRG-SSGGGGGVSPPSCQAERCGADLTDAKRYHR 87

Query: 55  RHKVCQLHAKALVVIVAG 2
           RHKVC+ H+KA VV+VAG
Sbjct: 88  RHKVCEFHSKAPVVVVAG 105


>gb|AFK42236.1| unknown [Medicago truncatula]
          Length = 144

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
 Frame = -3

Query: 247 QNTFAFRKFEGEEEYGVADLVFEKERSGKKKKAVSTATYGTVS---------PPRCQVES 95
           + +  +++   EEE    D  FE+E  G++K+ V T  Y   S         PP CQVE+
Sbjct: 9   KRSLKYKEDHEEEEEEEEDTDFEEEEDGRRKRVV-TDLYSKRSSKKAGSSNIPPCCQVEN 67

Query: 94  CLVDLSNEMRYYRRHKVCQLHAKALVVIVAG 2
           C  DLS   +Y+RRHKVC+ HAKA  V +AG
Sbjct: 68  CDADLSEAKQYHRRHKVCEYHAKAPAVHIAG 98


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