BLASTX nr result

ID: Bupleurum21_contig00038391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038391
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527531.1| DNA binding protein, putative [Ricinus commu...   132   4e-29
ref|XP_002263205.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...   132   4e-29
ref|XP_002301666.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_003544360.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...   118   6e-25
ref|XP_003518369.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...   115   3e-24

>ref|XP_002527531.1| DNA binding protein, putative [Ricinus communis]
           gi|223533081|gb|EEF34840.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 679

 Score =  132 bits (331), Expect = 4e-29
 Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 8/140 (5%)
 Frame = -1

Query: 399 QELRDGARQCIGDTGLIDFVLKSINNYSMIGNQIISRAKNPFTRLIEFAIRD-------E 241
           Q+LRD  RQ IGDTGLIDFVLK I+   ++GNQ+I RA  P ++L+EF++ D       E
Sbjct: 370 QDLRDAVRQHIGDTGLIDFVLKHIDKV-IVGNQVIVRANKPVSKLLEFSLEDISDGATLE 428

Query: 240 NVVDSTTLISH-EPGLNVYGDILFLYRNVLLGYPEWDTVSLATRAILNSKDFVKEWVFDE 64
               S T IS  + GLNV  D+LFLY+NVLLGYP++  V++A R IL+ K F KEW +  
Sbjct: 429 KKAQSHTDISTLKLGLNVRKDLLFLYKNVLLGYPDYHAVAIAARVILDCKHFFKEWQYKS 488

Query: 63  EENDQLMTLTCRVFPSFDEL 4
              D L+TL C+V PS+DEL
Sbjct: 489 SNEDALLTLICQVRPSYDEL 508


>ref|XP_002263205.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Vitis
           vinifera] gi|147772045|emb|CAN73422.1| hypothetical
           protein VITISV_032904 [Vitis vinifera]
           gi|296087078|emb|CBI33452.3| unnamed protein product
           [Vitis vinifera]
          Length = 683

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 15/147 (10%)
 Frame = -1

Query: 399 QELRDGARQCIGDTGLIDFVLKSINNYSMIGNQIISRAKNPFTRLIEFAIRDENVVDSTT 220
           QE+RD AR  IGDTGL+D+VLKS+NN  ++GN ++ RA NP TR++E+ +++   +   T
Sbjct: 372 QEVRDAARMHIGDTGLLDYVLKSMNNV-IVGNHVVCRAVNPATRVLEYTLKE---LGKGT 427

Query: 219 LISH---------------EPGLNVYGDILFLYRNVLLGYPEWDTVSLATRAILNSKDFV 85
           L+S                 PG +VY D+++LYRNVLL YP+ + V LATRA+L+SK FV
Sbjct: 428 LVSELESEMLPKPFPEQSIVPGADVYNDVIYLYRNVLLNYPDSELVELATRAVLDSKHFV 487

Query: 84  KEWVFDEEENDQLMTLTCRVFPSFDEL 4
           KEW F +E+ DQL+   C + PS  EL
Sbjct: 488 KEWPFSDED-DQLLRFVCHMMPSLSEL 513


>ref|XP_002301666.1| predicted protein [Populus trichocarpa] gi|222843392|gb|EEE80939.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/142 (45%), Positives = 98/142 (69%), Gaps = 10/142 (7%)
 Frame = -1

Query: 399 QELRDGARQCIGDTGLIDFVLKSINNYSMIGNQIISRAKNPFTRLIEFAIRD-------- 244
           Q++RD AR  IGDTGL+D+VLKS+NN  ++G  ++ RA NP TR++E++I +        
Sbjct: 307 QDVRDAARMHIGDTGLLDYVLKSMNNV-VVGKYVVQRAVNPKTRILEYSIDEFGDGIIPV 365

Query: 243 ENVVDSTTLISHE--PGLNVYGDILFLYRNVLLGYPEWDTVSLATRAILNSKDFVKEWVF 70
           ++  +S T+ +    PG +V  D++F+Y NVL  YPE + V +AT+AIL+SK FVKEW F
Sbjct: 366 KSEPESETVPAQPLLPGADVNADVVFVYENVLFNYPESELVEVATQAILDSKHFVKEWPF 425

Query: 69  DEEENDQLMTLTCRVFPSFDEL 4
              ENDQL++  C+V P++++L
Sbjct: 426 -RVENDQLLSFICQVMPTWNDL 446


>ref|XP_003544360.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1-like [Glycine
           max]
          Length = 708

 Score =  118 bits (295), Expect = 6e-25
 Identities = 64/149 (42%), Positives = 93/149 (62%), Gaps = 20/149 (13%)
 Frame = -1

Query: 399 QELRDGARQCIGDTGLIDFVLKSINNYSMIGNQIISRAKNPFTRLIEFAIRD-------- 244
           Q++RD AR  IGDTGL+D+VLKS+NN  +IGN ++ R  NP TR++E+ I D        
Sbjct: 379 QDVRDAARLHIGDTGLLDYVLKSLNNV-IIGNYVVRRMVNPSTRILEYTIHDLGKGSKAP 437

Query: 243 ------------ENVVDSTTLISHEPGLNVYGDILFLYRNVLLGYPEWDTVSLATRAILN 100
                       + VV+S+ ++    G +VY D LFLY+NVLLGYP+ + V  A + IL+
Sbjct: 438 EENKPEVMAHADQQVVESSWML----GNDVYSDALFLYKNVLLGYPDSEAVDTAVQTILD 493

Query: 99  SKDFVKEWVFDEEENDQLMTLTCRVFPSF 13
           S+ FVKEW   +E  +Q++T  CR+ P+F
Sbjct: 494 SRYFVKEWPVRDEMKEQVLTFICRLQPNF 522


>ref|XP_003518369.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1-like [Glycine
           max]
          Length = 707

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 15/144 (10%)
 Frame = -1

Query: 399 QELRDGARQCIGDTGLIDFVLKSINNYSMIGNQIISRAKNPFTRLIEFAIRD-------- 244
           Q++RD AR  IGDTGL+D+VLKS+NN  ++GN ++ R  NP TR++E+ I D        
Sbjct: 381 QDVRDAARIHIGDTGLLDYVLKSLNNV-IVGNYVVRRMVNPTTRILEYTIHDLGKGLKAP 439

Query: 243 -------ENVVDSTTLISHEPGLNVYGDILFLYRNVLLGYPEWDTVSLATRAILNSKDFV 85
                   +V       S +PG +VY D LFLY+NVLL YP+ + V  A + IL+S+ FV
Sbjct: 440 EVETEVMAHVDQQVEESSWKPGNDVYCDALFLYKNVLLSYPDSEAVDTAVQTILDSRYFV 499

Query: 84  KEWVFDEEENDQLMTLTCRVFPSF 13
           KEW   +E  +Q++T  CR+ P+F
Sbjct: 500 KEWPVRDEIKEQVLTFICRLQPNF 523


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