BLASTX nr result

ID: Bupleurum21_contig00038376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038376
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]    75   5e-12
ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246...    73   3e-11
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
emb|CBI35891.3| unnamed protein product [Vitis vinifera]               70   2e-10

>emb|CAN69469.1| hypothetical protein VITISV_042556 [Vitis vinifera]
          Length = 403

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 52/97 (53%), Positives = 62/97 (63%), Gaps = 10/97 (10%)
 Frame = -1

Query: 314 AFLNSLFPSTGGNARKAKII-------ETNYKSANEP---SASSFSRSCLSKTPPSQGKS 165
           +FLNSLF  T G A+KAKI        E   KS +     SASSFSRSCLSKTP S+GK 
Sbjct: 211 SFLNSLF--TTGTAKKAKISSSEDSTPERKSKSGHTSTCSSASSFSRSCLSKTPSSRGKL 268

Query: 164 SQGAKRSVRFYPVISVIMDKDYQLDKHTDNERCRYDN 54
           S G KRSVRFYPV SVI+D+D +   H    +C Y++
Sbjct: 269 SNGTKRSVRFYPV-SVIVDEDCRPCGH----KCLYED 300


>ref|XP_002276086.2| PREDICTED: uncharacterized protein LOC100246362 [Vitis vinifera]
          Length = 403

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 51/97 (52%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
 Frame = -1

Query: 314 AFLNSLFPSTGGNARKAKII-------ETNYKSANEP---SASSFSRSCLSKTPPSQGKS 165
           +FLNSLF  T G A+KAKI        E   KS +     SASSFSRSCLSKTP S+ K 
Sbjct: 211 SFLNSLF--TTGTAKKAKISSSEDSTPERKSKSGHTSTCSSASSFSRSCLSKTPSSRSKL 268

Query: 164 SQGAKRSVRFYPVISVIMDKDYQLDKHTDNERCRYDN 54
           S G KRSVRFYPV SVI+D+D +   H    +C Y++
Sbjct: 269 SNGTKRSVRFYPV-SVIVDEDCRPCGH----KCLYED 300


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/84 (59%), Positives = 56/84 (66%), Gaps = 13/84 (15%)
 Frame = -1

Query: 314 AFLNSLFPSTGGNARKAKII-------ETNYKSANEP---SASSFSRSCLSKTPPSQG-- 171
           +FLNSLF  T GNA+KAKI        E   KS       SASSFSRSCLSKTP S+G  
Sbjct: 228 SFLNSLF--TAGNAKKAKISTSGGRYEERKLKSEQASTCSSASSFSRSCLSKTPSSRGGK 285

Query: 170 -KSSQGAKRSVRFYPVISVIMDKD 102
             S+ GAKRSVRFYPV SVI+D+D
Sbjct: 286 LSSNNGAKRSVRFYPV-SVIVDED 308


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 50/84 (59%), Positives = 56/84 (66%), Gaps = 13/84 (15%)
 Frame = -1

Query: 314 AFLNSLFPSTGGNARKAKII-------ETNYKSANEP---SASSFSRSCLSKTPPSQG-- 171
           +FLNSLF  T GNA+KAKI        E   KS       SASSFSRSCLSKTP S+G  
Sbjct: 192 SFLNSLF--TTGNAKKAKITTPGGSYEERKLKSEQASTCSSASSFSRSCLSKTPSSRGGK 249

Query: 170 -KSSQGAKRSVRFYPVISVIMDKD 102
             S+ GAKRSVRFYPV SVI+D+D
Sbjct: 250 LSSNNGAKRSVRFYPV-SVIVDED 272


>emb|CBI35891.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 49/93 (52%), Positives = 58/93 (62%), Gaps = 12/93 (12%)
 Frame = -1

Query: 314 AFLNSLFPSTGGNARKAKII-------ETNYKSANEP---SASSFSRSCLSKTPPSQGKS 165
           +FLNSLF  T G A+KAKI        E   KS +     SASSFSRSCLSKTP S+ K 
Sbjct: 262 SFLNSLF--TTGTAKKAKISSSEDSTPERKSKSGHTSTCSSASSFSRSCLSKTPSSRSKL 319

Query: 164 SQGAKRSVRFYPVISVIMDKDY--QLDKHTDNE 72
           S G KRSVRFYPV SVI ++ Y  +   H D++
Sbjct: 320 SNGTKRSVRFYPV-SVIKNESYLREAANHEDSD 351


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