BLASTX nr result

ID: Bupleurum21_contig00038365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038365
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19274.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]   110   1e-22
ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245...   108   5e-22
ref|XP_002514048.1| DNA binding protein, putative [Ricinus commu...   105   3e-21
ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>emb|CBI19274.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   AERLDINGWDSNNLPPGKKRKRWSDAEDRELIAAVKIYGEGNWPHISQGDFKSERTASQL 181
           +E  D NG  S +LP  KKRK WS  ED+ELIAAV+  GEGNW +I +GDFK +R+ASQL
Sbjct: 177 SEGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRSASQL 236

Query: 182 SKRWNFLKKGKDN----XXXXXXXQLSEAHRAAHHAMSLALNMPMTNKLKASS 328
           S+RW  ++K   N           QLSEA  AA HAMSLAL+MP+ N   +SS
Sbjct: 237 SQRWTIIRKKHKNLNVGGANSNGSQLSEAQLAARHAMSLALDMPVKNLTTSSS 289


>emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]
          Length = 598

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/113 (53%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   AERLDINGWDSNNLPPGKKRKRWSDAEDRELIAAVKIYGEGNWPHISQGDFKSERTASQL 181
           +E  D NG  S +LP  KKRK WS  ED+ELIAAV+  GEGNW +I +GDFK +R+ASQL
Sbjct: 140 SEGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRSASQL 199

Query: 182 SKRWNFLKKGKDN----XXXXXXXQLSEAHRAAHHAMSLALNMPMTNKLKASS 328
           S+RW  ++K   N           QLSEA  AA HAMSLAL+MP+ N   +SS
Sbjct: 200 SQRWTIIRKKHKNLNVGGANSNGSQLSEAQLAARHAMSLALDMPVKNLTTSSS 252


>ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245507 [Vitis vinifera]
          Length = 606

 Score =  108 bits (270), Expect = 5e-22
 Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
 Frame = +2

Query: 2   AERLDINGWDSNNLPPGKKRKRWSDAEDRELIAAVKIYGEGNWPHISQGDFKSERTASQL 181
           +E  D NG  S +LP  KKRK WS  ED+ELIAAV+  GEGNW +I +GDFK +R+ASQL
Sbjct: 177 SEGFDANGSTSGSLPARKKRKPWSSDEDKELIAAVQKCGEGNWANILKGDFKGDRSASQL 236

Query: 182 SKRWNFLKKGKDN----XXXXXXXQLSEAHRAAHHAMSLALNMPMTN 310
           S+RW  ++K   N           QLSEA  AA HAMSLAL+MP+ N
Sbjct: 237 SQRWTIIRKKHKNLNVGGANSNGSQLSEAQLAARHAMSLALDMPVKN 283


>ref|XP_002514048.1| DNA binding protein, putative [Ricinus communis]
           gi|223547134|gb|EEF48631.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 608

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 3/106 (2%)
 Frame = +2

Query: 5   ERLDINGWDSNNLPPGKKRKRWSDAEDRELIAAVKIYGEGNWPHISQGDFKSERTASQLS 184
           E  D NG  + N+PP +KRK WS+AED ELIAAV+ YGEGNW +I + +F  +RTASQLS
Sbjct: 187 EVFDGNGLGNGNIPPRRKRKPWSEAEDLELIAAVQKYGEGNWANILRSEFTWDRTASQLS 246

Query: 185 KRWNFLKKGKDN---XXXXXXXQLSEAHRAAHHAMSLALNMPMTNK 313
           +RW  ++K   N          QLSE  RAA HAM+LAL+ P+ NK
Sbjct: 247 QRWAIIRKRHGNWNPVGNTSGVQLSEEWRAARHAMNLALDPPVKNK 292


>ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|222844072|gb|EEE81619.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 56/113 (49%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
 Frame = +2

Query: 2   AERLDINGWDSNNLPPGKKRKRWSDAEDRELIAAVKIYGEGNWPHISQGDFKSERTASQL 181
           +E  D NG  S   PP +KRK WS+AED ELIAAV+  GEGNW  I +G+FK +RTASQL
Sbjct: 188 SEVYDANGSGSGTFPPRRKRKPWSEAEDMELIAAVQKLGEGNWASIVRGEFKGDRTASQL 247

Query: 182 SKRWNFLKKGKDN---XXXXXXXQLSEAHRAAHHAMSLALN-MPMTNKLKASS 328
           S+RW  ++K   N          QLSE  RAA  A+ +AL+  P    L ASS
Sbjct: 248 SQRWAIIRKRHGNLNVGTVSSAPQLSETQRAARDAVKMALDPHPAAKSLIASS 300


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