BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038353
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    55   8e-06

>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
 Frame = +2

Query: 11  CVLCGAADETVSHLFFDCSFSKGV-----IASSPVPIPH------DWVTSFHNGAGILQQ 157
           CVLC   DET  HLFF C FS  +     I +   P PH       W+ S  +   +   
Sbjct: 196 CVLCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMTP-PHLFGPILLWLKSASSSKNLSLI 254

Query: 158 FSYLFLASAVYNIWLERNHRVHGRHPRPCLVVSNCTKVMVRDKAHSSAKLKQLFRKNP 331
              LF AS VY IW ERN R+H  H R    +    + ++R      A+L  + R+ P
Sbjct: 255 IKLLFQAS-VYLIWRERNCRIHTTHSRTPPTIIKEVQQLIR------ARLDPICRERP 305