BLASTX nr result

ID: Bupleurum21_contig00038341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038341
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25234.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein lig...    67   2e-09
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]    67   2e-09
ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...    64   2e-08

>emb|CBI25234.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -2

Query: 309 RVVWHVGMDCKEFQKKNKDEEEAKQDMSLHQLAKEKCWQQCPGCKFYIELYYGGCH 142
           RV WH GM+C+E Q+ N DE   ++DM L +LA+EK W++CP CKFY+E   G  H
Sbjct: 233 RVPWHSGMECREVQRLNADER-GREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVH 287


>ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Vitis
           vinifera]
          Length = 378

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -2

Query: 309 RVVWHVGMDCKEFQKKNKDEEEAKQDMSLHQLAKEKCWQQCPGCKFYIELYYGGCH 142
           RV WH GM+C+E Q+ N DE   ++DM L +LA+EK W++CP CKFY+E   G  H
Sbjct: 296 RVPWHSGMECREVQRLNADER-GREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVH 350


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -2

Query: 309 RVVWHVGMDCKEFQKKNKDEEEAKQDMSLHQLAKEKCWQQCPGCKFYIELYYGGCH 142
           RV WH GM+C+E Q+ N DE   ++DM L +LA+EK W++CP CKFY+E   G  H
Sbjct: 711 RVPWHSGMECREVQRLNADER-GREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVH 765



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = -2

Query: 306 VVWHVGMDCKEFQKKNKDEEEAKQDMSLHQLAKEKCWQQCPGCKFYIELYYGGCH 142
           V WH G+ C+E+Q  N+DE+  ++D+ L +LA+EK W++CP CKFY+E   G  H
Sbjct: 185 VPWHSGVGCEEYQMMNEDEK-GREDLMLRELAQEKKWRRCPQCKFYVEKIEGCLH 238


>ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|222841400|gb|EEE78947.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = -2

Query: 306 VVWHVGMDCKEFQKKNKDEEEAKQDMSLHQLAKEKCWQQCPGCKFYIELYYGGCH 142
           V WH G++C+EFQ+ N+DE   ++D+ L +LAK+K W +CP CKFY+E   G  H
Sbjct: 227 VPWHSGIECEEFQRLNEDER-GREDLMLRELAKDKKWSRCPQCKFYVERTEGCPH 280


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -2

Query: 306 VVWHVGMDCKEFQKKNKDEEEAKQDMSLHQLAKEKCWQQCPGCKFYIELYYG 151
           V WH G+DC EFQK NKDE   ++D+ +  LAK   W++CP CKFY+E  +G
Sbjct: 247 VPWHSGIDCGEFQKLNKDER-GREDILMMNLAKTNNWKRCPKCKFYVEKSFG 297


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