BLASTX nr result

ID: Bupleurum21_contig00038313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038313
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containi...    55   5e-06
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...    55   5e-06

>ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 442

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/88 (37%), Positives = 49/88 (55%)
 Frame = -2

Query: 268 INFQEFSVLERLKFCKSLQELKQIHGFIIKTSPTIYCHRLIYNKSIYFSSNVPSYSDLSY 89
           I F   +++  L  CKS+ ELK+IH  +      I     I +K + FS+  P+  DL Y
Sbjct: 9   IAFLNQTLISLLDGCKSMFELKRIHALLFTLG--ISQDETIKSKLLLFSALSPA-RDLDY 65

Query: 88  AYSLFATLPEPFTTDYNAIIRCFSSTKN 5
           +Y L   +P P T ++N +IR FS+TKN
Sbjct: 66  SYKLILNVPNPTTFNWNTLIRAFSNTKN 93


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/88 (37%), Positives = 49/88 (55%)
 Frame = -2

Query: 268 INFQEFSVLERLKFCKSLQELKQIHGFIIKTSPTIYCHRLIYNKSIYFSSNVPSYSDLSY 89
           I F   +++  L  CKS+ ELK+IH  +      I     I +K + FS+  P+  DL Y
Sbjct: 9   IAFLNQTLISLLDGCKSMFELKRIHALLFTLG--ISQDETIKSKLLLFSALSPA-RDLDY 65

Query: 88  AYSLFATLPEPFTTDYNAIIRCFSSTKN 5
           +Y L   +P P T ++N +IR FS+TKN
Sbjct: 66  SYKLILNVPNPTTFNWNTLIRAFSNTKN 93


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