BLASTX nr result

ID: Bupleurum21_contig00038308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038308
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   116   2e-24
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   114   6e-24
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   114   6e-24
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   114   6e-24
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa...   110   9e-23

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1427

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/106 (50%), Positives = 74/106 (69%)
 Frame = +1

Query: 28   FCTYTNTSERFYLRMLLSIVRGAMSFNDLRTVNGVIYDTYKETCFHYGLLESDDEWHDAL 207
            +  +  + ER+YLR+LL+IV G  S+ +++TV GV Y T+KETC   GLL  + EW+DAL
Sbjct: 755  YYAHPTSGERYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNALGLLNDNKEWNDAL 814

Query: 208  RDASIHQTGAQLRQLFVALLLFCDVSDVRALWNNHWKTFSDDIELK 345
             +AS   TG QLR+LFV +LL+ +V+D+  LW  +WKT SDDI  K
Sbjct: 815  NEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYK 860


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/106 (49%), Positives = 74/106 (69%)
 Frame = +1

Query: 28   FCTYTNTSERFYLRMLLSIVRGAMSFNDLRTVNGVIYDTYKETCFHYGLLESDDEWHDAL 207
            +  +  + E++YLR+LL+IV G  S+ +++TV GV Y T+KETC   GLL  + EW+DAL
Sbjct: 755  YYAHPTSGEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNALGLLNDNREWNDAL 814

Query: 208  RDASIHQTGAQLRQLFVALLLFCDVSDVRALWNNHWKTFSDDIELK 345
             +AS   TG QLR+LFV +LL+ +V+D+  LW  +WKT SDDI  K
Sbjct: 815  NEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYK 860


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1531

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/106 (49%), Positives = 74/106 (69%)
 Frame = +1

Query: 28   FCTYTNTSERFYLRMLLSIVRGAMSFNDLRTVNGVIYDTYKETCFHYGLLESDDEWHDAL 207
            +  +  + E++YLR+LL+IV G  S+ +++TV GV Y T+KETC   GLL  + EW+DAL
Sbjct: 728  YYAHPTSGEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNALGLLNDNREWNDAL 787

Query: 208  RDASIHQTGAQLRQLFVALLLFCDVSDVRALWNNHWKTFSDDIELK 345
             +AS   TG QLR+LFV +LL+ +V+D+  LW  +WKT SDDI  K
Sbjct: 788  NEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYK 833


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/106 (49%), Positives = 74/106 (69%)
 Frame = +1

Query: 28   FCTYTNTSERFYLRMLLSIVRGAMSFNDLRTVNGVIYDTYKETCFHYGLLESDDEWHDAL 207
            +  +  + E++YLR+LL+IV G  S+ +++TV GV Y T+KETC   GLL  + EW+DAL
Sbjct: 755  YYAHPTSGEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNALGLLNDNREWNDAL 814

Query: 208  RDASIHQTGAQLRQLFVALLLFCDVSDVRALWNNHWKTFSDDIELK 345
             +AS   TG QLR+LFV +LL+ +V+D+  LW  +WKT SDDI  K
Sbjct: 815  NEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYK 860


>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa Japonica Group]
            gi|77549546|gb|ABA92343.1| AT hook motif-containing
            protein, putative [Oryza sativa Japonica Group]
          Length = 2157

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/103 (49%), Positives = 71/103 (68%)
 Frame = +1

Query: 28   FCTYTNTSERFYLRMLLSIVRGAMSFNDLRTVNGVIYDTYKETCFHYGLLESDDEWHDAL 207
            +  +    E +YLRMLL IV+GA S+ D+RT +GV+Y TY+E C   GLLE D+EWH   
Sbjct: 898  YYVHPTAGELYYLRMLLMIVKGAQSYADVRTYDGVVYGTYREACEARGLLEGDNEWHLLF 957

Query: 208  RDASIHQTGAQLRQLFVALLLFCDVSDVRALWNNHWKTFSDDI 336
             +A +  + AQLRQLFV +LL+C V DVR+L++ +W   +DDI
Sbjct: 958  DEAIVTASSAQLRQLFVTVLLYCSVGDVRSLFDKYWLYMTDDI 1000


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