BLASTX nr result

ID: Bupleurum21_contig00038299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038299
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   296   8e-78
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              296   8e-78
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   273   6e-71
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   242   1e-61

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  296 bits (757), Expect = 8e-78
 Identities = 164/372 (44%), Positives = 231/372 (62%), Gaps = 2/372 (0%)
 Frame = +3

Query: 3    SHNLLIRPSQMVDAHNFLLSSAQCLLQQVIYAHKKSFEADKYAAVESWFCMNQEGISTKD 182
            SHNL    +   D H FLLS+A+ L QQ+IY H+K+F+AD YA ++  F   Q+  ++++
Sbjct: 3004 SHNLWKSSTPRTDLHGFLLSAARALFQQIIYTHQKTFDADNYATIKFIFSSFQKTNASQE 3063

Query: 183  KINEMVLFLSSSNHHKFTTLMDSLIEPLLTELYLQRSSKDCEYSLGCSWLRVGALRYHLL 362
             I  +   ++SSNHH+ T  + S IEP+L ELYLQ SS D  Y+LGC+W R+G LR+ LL
Sbjct: 3064 NIKVLSSLIASSNHHRLTASIPSFIEPVLRELYLQCSSTDFLYNLGCAWSRIGGLRFCLL 3123

Query: 363  ICCDDLDPTVKYSIRHMLLEEKIASLELEEKVRKECEHLAGCFSVRDATKQKTAXXXXXX 542
            +   DLDP +KYSI++ LLEEKI+SLELE KVR+EC+HL G FS R+A KQ+        
Sbjct: 3124 LSSSDLDPAMKYSIKYSLLEEKISSLELETKVRQECDHLVGWFSTREADKQRAKALENLK 3183

Query: 543  XXXXXXXXXIVFRMDPGKFIKLKSECDEFIYFVATSL-GLTMSVKTMNQEVAV-QIQNCQ 716
                     +VFR DPGKF  LK E  EF+  V   +  L  +++ M+ +V + ++ N Q
Sbjct: 3184 VERERLQKKMVFRSDPGKFKDLKHEFGEFLKRVTYLVDDLMRNIEVMDLQVMIGEVCNWQ 3243

Query: 717  ETITRFIERLSDEYAAYVDIIQPVQVALYEMXXXXXXXXXXXXHERFLDEAGQDDMDKVV 896
            ET T F+ RLSDEYAAY DIIQPVQVA+YEM             + F +   QD+MD ++
Sbjct: 3244 ETATCFVNRLSDEYAAYTDIIQPVQVAVYEMKLGLSLVLSSSLQKGFQNRVMQDNMDGIL 3303

Query: 897  ETIYSFMRFPRGYSSEAASLLVDSRGAKLTVSNIVYPITIMTSNTSLLETLVALSSDVES 1076
             TIYSF+RFPR  + E+ ++ V        V +   P  + + + ++LE LV ++  + +
Sbjct: 3304 ATIYSFIRFPRDNAGESIAVEVKFEFPSYGVGS---PSNVWSLDMNVLEKLVTITRGLNA 3360

Query: 1077 DRMISGLQLKAA 1112
            DR +S LQLKAA
Sbjct: 3361 DRTVSVLQLKAA 3372


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  296 bits (757), Expect = 8e-78
 Identities = 164/372 (44%), Positives = 231/372 (62%), Gaps = 2/372 (0%)
 Frame = +3

Query: 3    SHNLLIRPSQMVDAHNFLLSSAQCLLQQVIYAHKKSFEADKYAAVESWFCMNQEGISTKD 182
            SHNL    +   D H FLLS+A+ L QQ+IY H+K+F+AD YA ++  F   Q+  ++++
Sbjct: 2901 SHNLWKSSTPRTDLHGFLLSAARALFQQIIYTHQKTFDADNYATIKFIFSSFQKTNASQE 2960

Query: 183  KINEMVLFLSSSNHHKFTTLMDSLIEPLLTELYLQRSSKDCEYSLGCSWLRVGALRYHLL 362
             I  +   ++SSNHH+ T  + S IEP+L ELYLQ SS D  Y+LGC+W R+G LR+ LL
Sbjct: 2961 NIKVLSSLIASSNHHRLTASIPSFIEPVLRELYLQCSSTDFLYNLGCAWSRIGGLRFCLL 3020

Query: 363  ICCDDLDPTVKYSIRHMLLEEKIASLELEEKVRKECEHLAGCFSVRDATKQKTAXXXXXX 542
            +   DLDP +KYSI++ LLEEKI+SLELE KVR+EC+HL G FS R+A KQ+        
Sbjct: 3021 LSSSDLDPAMKYSIKYSLLEEKISSLELETKVRQECDHLVGWFSTREADKQRAKALENLK 3080

Query: 543  XXXXXXXXXIVFRMDPGKFIKLKSECDEFIYFVATSL-GLTMSVKTMNQEVAV-QIQNCQ 716
                     +VFR DPGKF  LK E  EF+  V   +  L  +++ M+ +V + ++ N Q
Sbjct: 3081 VERERLQKKMVFRSDPGKFKDLKHEFGEFLKRVTYLVDDLMRNIEVMDLQVMIGEVCNWQ 3140

Query: 717  ETITRFIERLSDEYAAYVDIIQPVQVALYEMXXXXXXXXXXXXHERFLDEAGQDDMDKVV 896
            ET T F+ RLSDEYAAY DIIQPVQVA+YEM             + F +   QD+MD ++
Sbjct: 3141 ETATCFVNRLSDEYAAYTDIIQPVQVAVYEMKLGLSLVLSSSLQKGFQNRVMQDNMDGIL 3200

Query: 897  ETIYSFMRFPRGYSSEAASLLVDSRGAKLTVSNIVYPITIMTSNTSLLETLVALSSDVES 1076
             TIYSF+RFPR  + E+ ++ V        V +   P  + + + ++LE LV ++  + +
Sbjct: 3201 ATIYSFIRFPRDNAGESIAVEVKFEFPSYGVGS---PSNVWSLDMNVLEKLVTITRGLNA 3257

Query: 1077 DRMISGLQLKAA 1112
            DR +S LQLKAA
Sbjct: 3258 DRTVSVLQLKAA 3269


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  273 bits (698), Expect = 6e-71
 Identities = 149/372 (40%), Positives = 228/372 (61%), Gaps = 2/372 (0%)
 Frame = +3

Query: 3    SHNLLIRPSQMVDAHNFLLSSAQCLLQQVIYAHKKSFEADKYAAVESWFCMNQEGISTKD 182
            SHNL   P    +  + LLS A+ L QQ+++AH++  +ADK++A+++ FC  Q+ + T+D
Sbjct: 2984 SHNLWQSPPTKNNLPSILLSVARSLFQQIVHAHERVLDADKFSAIKAIFCSFQKNMITQD 3043

Query: 183  KINEMVLFLSSSNHHKFTTLMDSLIEPLLTELYLQRSSKDCEYSLGCSWLRVGALRYHLL 362
            ++  +   L+SS+  +  +LM  LIEPLL ELYL  SS D   ++G +WLR+G LR++LL
Sbjct: 3044 EVQNLRSLLASSSDQRLNSLMHPLIEPLLRELYLDCSSTDFYLNIGYAWLRIGGLRFNLL 3103

Query: 363  ICCDDLDPTVKYSIRHMLLEEKIASLELEEKVRKECEHLAGCFSVRDATKQKTAXXXXXX 542
            + C  +DP +KYS +H  LEEKI+SLELE KVR+EC++LAG F  R A K++        
Sbjct: 3104 LGCHHMDPAMKYSFKHSQLEEKISSLELEIKVRQECDYLAGWFGTRKADKKRVESLQMLE 3163

Query: 543  XXXXXXXXXIVFRMDPGKFIKLKSECDEFIYFVATSLGLTMSVKTMN-QEVAVQIQNCQE 719
                     +VFR +P KF  L+ +C EF   V   + L  +V+ +  Q+  +Q+ + Q+
Sbjct: 3164 VERKRLQRKMVFRSNPSKFSALRKDCKEFFRRVMVVMDLVSNVEVVEFQQFLIQVSDWQK 3223

Query: 720  TITRFIERLSDEYAAYVDIIQPVQVALYEMXXXXXXXXXXXXHERFLDEAGQDDMDKVVE 899
            T T FIE+LS++Y  Y+D+ QPVQVA+YEM             +R  ++   D+M++V+E
Sbjct: 3224 TATCFIEQLSNDYKEYIDVAQPVQVAIYEMKLGLSLVLSAALWKRNSNKIEVDNMEQVME 3283

Query: 900  TIYSFMRFPRGYSSEAASLLVDSRGAKLTVSNIVY-PITIMTSNTSLLETLVALSSDVES 1076
            +I SFMRFPRGY  ++ S            SN +Y P+  +   T+LLE +V+LSSD+ +
Sbjct: 3284 SICSFMRFPRGYGLDSIS------------SNDIYAPLNFLEQQTNLLEKVVSLSSDINA 3331

Query: 1077 DRMISGLQLKAA 1112
            +R  S LQLK +
Sbjct: 3332 ERGASVLQLKTS 3343


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  265 bits (678), Expect = 1e-68
 Identities = 150/358 (41%), Positives = 216/358 (60%), Gaps = 1/358 (0%)
 Frame = +3

Query: 36   VDAHNFLLSSAQCLLQQVIYAHKKSFEADKYAAVESWFCMNQEGISTKDKINEMVLFLSS 215
            +D  +FLLS  + L QQ+IYAH+K+F+ADK+AA++S FC   + ++T+D I  +V  L S
Sbjct: 3053 MDLSSFLLSVTRSLFQQIIYAHRKAFDADKFAAIKSIFCSFHKNVATQDDIQRLVSILGS 3112

Query: 216  SNHHKFTTLMDSLIEPLLTELYLQRSSKDCEYSLGCSWLRVGALRYHLLICCDDLDPTVK 395
            SNH K  +L+   IEP+L +LYL  SS +   ++G + L++GALR+ LL+ CDD DP +K
Sbjct: 3113 SNHQKLNSLVSLFIEPILKKLYLHCSSTEVYLNMGHACLKIGALRFSLLLSCDDFDPAMK 3172

Query: 396  YSIRHMLLEEKIASLELEEKVRKECEHLAGCFSVRDATKQKTAXXXXXXXXXXXXXXXIV 575
            YS +H  LEE+I+SLELE KVR+EC++LAG  S  +A K++                 +V
Sbjct: 3173 YSFKHSQLEERISSLELEIKVRQECDYLAGRLSSIEADKKRADSLERLEFECRRIQKKMV 3232

Query: 576  FRMDPGKFIKLKSECDEFIYFVATSLGLTMSVKTMN-QEVAVQIQNCQETITRFIERLSD 752
            FR +P KF  L+ EC EF+      +GL  +++ M+ Q+V  Q  N Q T T FI+RLSD
Sbjct: 3233 FRCNPLKFNALRKECGEFLKPARMVVGLVDNIEGMDLQQVLEQASNWQATATSFIDRLSD 3292

Query: 753  EYAAYVDIIQPVQVALYEMXXXXXXXXXXXXHERFLDEAGQDDMDKVVETIYSFMRFPRG 932
            EY  Y+D+ QP QVA+YEM             ++ L+   +D+MD+V+E+IYSFMRFPR 
Sbjct: 3293 EYKEYIDLAQPFQVAVYEMKLGLSLVLSFALLKKVLNRIKEDNMDRVMESIYSFMRFPRV 3352

Query: 933  YSSEAASLLVDSRGAKLTVSNIVYPITIMTSNTSLLETLVALSSDVESDRMISGLQLK 1106
             +   +S             +I  P T        LE L  LSS+V +++M S LQLK
Sbjct: 3353 RAFVPSS-----------SHSIGSPATFWDREMGFLEKLNMLSSEVTTEKMGSILQLK 3399


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  242 bits (618), Expect = 1e-61
 Identities = 139/357 (38%), Positives = 213/357 (59%), Gaps = 3/357 (0%)
 Frame = +3

Query: 51   FLLSSAQCLLQQVIYAHKKSFEADKYAAVESWFCMNQEGISTKDKINEMVLFLSSSNHHK 230
            FLLS+A+ L QQ+IYAH+KSF+AD+YAA++  F   +  ++T++ I+ +   + SS HH+
Sbjct: 2764 FLLSAARALFQQIIYAHRKSFDADQYAAIKYNFSSFERNMATEESIHLVSTLVGSSRHHR 2823

Query: 231  FTTLMDSLIEPLLTELYLQRSSKD--CEYSLGCSWLRVGALRYHLLICCDDLDPTVKYSI 404
                ++  I PLL ELY+Q ++ D    Y++GC+W  +GALR HLL+  +++DP +KY  
Sbjct: 2824 LKNSVNKFIVPLLRELYIQSTTTDFNFNYTIGCAWAHIGALRIHLLLSYNEVDPVMKYYC 2883

Query: 405  RHMLLEEKIASLELEEKVRKECEHLAGCFSVRDATKQKTAXXXXXXXXXXXXXXXIVFRM 584
            ++  LEE I+SLELE +VRKEC +L+G F   +A K+K                 IVFR 
Sbjct: 2884 KYTQLEETISSLELEIQVRKECGYLSGQFLTVEADKRKAERLEKLQAELRKLQRKIVFRS 2943

Query: 585  DPGKFIKLKSECDEFIYFVATSLGLTMSVKTMN-QEVAVQIQNCQETITRFIERLSDEYA 761
            +  K+ KL +ECDEF+  +A+   L  +V+  + Q+V  +  + QET   FI RL+DEY 
Sbjct: 2944 ESWKYKKLMNECDEFLKHIASLEVLVGNVEAEDLQQVIDRTHSWQETAMCFINRLTDEYT 3003

Query: 762  AYVDIIQPVQVALYEMXXXXXXXXXXXXHERFLDEAGQDDMDKVVETIYSFMRFPRGYSS 941
            AY DIIQP+QVA+YEM             + +L + G ++++ V + IY  MRFPR  S 
Sbjct: 3004 AYNDIIQPIQVAVYEMKFGLSLVLSSFLEKEYLRKVGHENINLVTDMIYILMRFPRAASW 3063

Query: 942  EAASLLVDSRGAKLTVSNIVYPITIMTSNTSLLETLVALSSDVESDRMISGLQLKAA 1112
            +  S  V+  G  L  S  +   T    N  L+E L+ LSS V +D+ +S ++ +A+
Sbjct: 3064 KFIS--VEDVGVDLHSSYKLDFGTDFYLNMGLIERLITLSSGVSADKKVSAMRCRAS 3118


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