BLASTX nr result

ID: Bupleurum21_contig00038246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038246
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus...   132   2e-29
ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_002312906.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 530

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/96 (65%), Positives = 80/96 (83%)
 Frame = +2

Query: 5   VARTNVGSCGTCCCCKERLVCVDLGREETDKFADSVASLAMKREVESNFRDFQDWLDEHC 184
           V+RT+VG+ G CCCC E+LVCVD+   E +KFA SVA+LA +REV++NF +FQ WL++H 
Sbjct: 254 VSRTSVGADGHCCCCGEQLVCVDIDDAEREKFAGSVAALAFEREVKANFSEFQAWLEKHA 313

Query: 185 EYEAVVDAANIGLYQQNFAEGGFSMAQLVTVVKELY 292
            YEA+VD ANIGLYQQNFA+GGFS++QL  VVKELY
Sbjct: 314 SYEAIVDGANIGLYQQNFADGGFSISQLDDVVKELY 349


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/96 (63%), Positives = 80/96 (83%)
 Frame = +2

Query: 5   VARTNVGSCGTCCCCKERLVCVDLGREETDKFADSVASLAMKREVESNFRDFQDWLDEHC 184
           V+RT+V + G CCCC ++LVCVD+   ET+KFA SVA+LA +REV++NF +FQ WL++H 
Sbjct: 253 VSRTSVVADGHCCCCGQQLVCVDIDDVETEKFAGSVAALAFEREVKANFSEFQAWLEKHA 312

Query: 185 EYEAVVDAANIGLYQQNFAEGGFSMAQLVTVVKELY 292
            YEA+VD ANIGLYQQNFA+GGF+++QL  VVKELY
Sbjct: 313 SYEAIVDGANIGLYQQNFADGGFNISQLDDVVKELY 348


>ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223531469|gb|EEF33301.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 561

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/96 (62%), Positives = 77/96 (80%)
 Frame = +2

Query: 5   VARTNVGSCGTCCCCKERLVCVDLGREETDKFADSVASLAMKREVESNFRDFQDWLDEHC 184
           V R N+   G CCCC E L CVD+   ET++FA S+A LAM+REV++NF +FQDWLD++ 
Sbjct: 256 VKRGNMDMDGRCCCCGESLACVDIDDLETERFAGSLAGLAMEREVKANFSEFQDWLDKNA 315

Query: 185 EYEAVVDAANIGLYQQNFAEGGFSMAQLVTVVKELY 292
           +Y+A+VD AN+GLYQQNFAEGGFS++QL  VVKELY
Sbjct: 316 DYDAIVDGANVGLYQQNFAEGGFSISQLDAVVKELY 351


>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/96 (63%), Positives = 74/96 (77%)
 Frame = +2

Query: 5   VARTNVGSCGTCCCCKERLVCVDLGREETDKFADSVASLAMKREVESNFRDFQDWLDEHC 184
           V R  V S G C  C+E+L  VD+ R ET+ F +SVA++AM+REV SNFR+FQDWLD+H 
Sbjct: 247 VCRAKVDSSGQCGSCREQLATVDIDRAETETFLESVAAMAMEREVRSNFREFQDWLDKHA 306

Query: 185 EYEAVVDAANIGLYQQNFAEGGFSMAQLVTVVKELY 292
           +YEA+VD ANIGLYQQNFA G FS+ QL  VVKELY
Sbjct: 307 DYEAIVDGANIGLYQQNFANGEFSIPQLDAVVKELY 342


>ref|XP_002312906.1| predicted protein [Populus trichocarpa] gi|222849314|gb|EEE86861.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/95 (64%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +2

Query: 11  RTNVGSCGTCCCCKERLVCVDLGREETDKFADSVASLAMKREVESNFRDFQDWLDEHCEY 190
           R +V   G CCCC E+LV VD+  +ET++FA+SVA LAM+REV++NF +FQ+WL+EH  Y
Sbjct: 248 RGSVDVGGKCCCCGEQLVSVDIDDDETERFAESVAGLAMQREVKANFSEFQNWLEEHANY 307

Query: 191 EAVVDAANIGLYQQNFAEGGFSMA-QLVTVVKELY 292
           EA+VD ANIGLYQQNFAEGGFS++ QL  VVK+LY
Sbjct: 308 EAIVDGANIGLYQQNFAEGGFSISQQLDAVVKDLY 342


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