BLASTX nr result

ID: Bupleurum21_contig00038237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038237
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39437.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...    84   2e-14
ref|NP_001056937.1| Os06g0171800 [Oryza sativa Japonica Group] g...    77   2e-12
ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 hom...    75   4e-12
gb|EEC80104.1| hypothetical protein OsI_21850 [Oryza sativa Indi...    74   1e-11

>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
 Frame = +1

Query: 13  LSIAITQSYSNLNNERNVEGSSCSTVVEAPASDWVTCPVCQKKVPGDDLTVNTHLDDCLS 192
           LS++  ++   L     V G + S+ V     DWV CPVC   + G+D  +N+HLD CL+
Sbjct: 34  LSLSGDENGGMLERTAGVSGETTSSKV-----DWVPCPVCGSTIRGEDYMINSHLDACLA 88

Query: 193 RGTKRKLSQRTLLELNF------RRESNKLKHTEVDNVQTSSDCDVRGALNTSCDLV--- 345
           RGTKRKL+QRTLL+LNF      + +S + KH E   V  + D ++  +       +   
Sbjct: 89  RGTKRKLTQRTLLQLNFCSRSMDKLDSGESKHLENSGVLKAPDNNLVRSTTPKFSYLGAF 148

Query: 346 EENDNLECKACTSRDHIM 399
           EENDN + K     D +M
Sbjct: 149 EENDNKQFKLDIHLDSVM 166


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
 Frame = +1

Query: 13  LSIAITQSYSNLNNERNVEGSSCSTVVEAPASDWVTCPVCQKKVPGDDLTVNTHLDDCLS 192
           LS++  ++   L     V G + S+ V     DWV CPVC   + G+D  +N+HLD CL+
Sbjct: 34  LSLSGDENGGMLERTAGVSGETTSSKV-----DWVPCPVCGSTIRGEDYMINSHLDACLA 88

Query: 193 RGTKRKLSQRTLLELNF------RRESNKLKHTEVDNVQTSSDCDVRGALNTSCDLV--- 345
           RGTKRKL+QRTLL+LNF      + +S + KH E   V  + D ++  +       +   
Sbjct: 89  RGTKRKLTQRTLLQLNFCSRSMDKLDSGESKHLENSGVLKAPDNNLVRSTTPKFSYLGAF 148

Query: 346 EENDNLECKACTSRDHIM 399
           EENDN + K     D +M
Sbjct: 149 EENDNKQFKLDIHLDSVM 166


>ref|NP_001056937.1| Os06g0171800 [Oryza sativa Japonica Group]
           gi|75108875|sp|Q5SNL7.1|FAN1_ORYSJ RecName:
           Full=Fanconi-associated nuclease 1 homolog
           gi|55773650|dbj|BAD72189.1| unknown protein [Oryza
           sativa Japonica Group] gi|113594977|dbj|BAF18851.1|
           Os06g0171800 [Oryza sativa Japonica Group]
          Length = 964

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
 Frame = +1

Query: 4   PTILSIAITQSYSNLNNERNVE------GSSCSTVVEAPASDWVTCPVCQKKVPGDDLTV 165
           P  L++A+  S S  ++  + E      GSS      A A+ WV CPVC + + G D  V
Sbjct: 21  PAALALAVPPSRSLQDDAADAEREAAAGGSSSGGGDAAGAAGWVACPVCGESIRGTDYCV 80

Query: 166 NTHLDDCLSRGTKRKLSQRTLLELNFRRESNKLKHTEVDNVQTSSDCD 309
           NTHLD CL+RGTKRKL+Q TLL+ +F R++       ++N+ TS + +
Sbjct: 81  NTHLDICLTRGTKRKLTQSTLLDFSFSRKAT--DDYALNNLNTSDEAE 126


>ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 homolog [Cucumis sativus]
           gi|449506836|ref|XP_004162862.1| PREDICTED:
           fanconi-associated nuclease 1 homolog [Cucumis sativus]
          Length = 949

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/72 (48%), Positives = 51/72 (70%)
 Frame = +1

Query: 55  ERNVEGSSCSTVVEAPASDWVTCPVCQKKVPGDDLTVNTHLDDCLSRGTKRKLSQRTLLE 234
           E+N++      +    + ++VTCPVC  +V G+D  +N+HLD+CLSRGTKRKL+Q TLL+
Sbjct: 44  EKNLDPCDDGDIESRTSREYVTCPVCSCRVNGEDSIINSHLDECLSRGTKRKLTQSTLLQ 103

Query: 235 LNFRRESNKLKH 270
           LNF   S K++H
Sbjct: 104 LNFYSRS-KVQH 114


>gb|EEC80104.1| hypothetical protein OsI_21850 [Oryza sativa Indica Group]
          Length = 949

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/90 (42%), Positives = 54/90 (60%)
 Frame = +1

Query: 40  SNLNNERNVEGSSCSTVVEAPASDWVTCPVCQKKVPGDDLTVNTHLDDCLSRGTKRKLSQ 219
           ++   E    GSS      A A+ WV CPVC + + G D  VNTHLD CL+RGTKRKL+Q
Sbjct: 73  ADAEREAAAGGSSSGGGDAAGAAGWVACPVCGESIRGTDYCVNTHLDICLTRGTKRKLTQ 132

Query: 220 RTLLELNFRRESNKLKHTEVDNVQTSSDCD 309
            TLL+ +F R++       ++N+ TS + +
Sbjct: 133 STLLDFSFSRKAT--DDYALNNLNTSDEAE 160


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