BLASTX nr result

ID: Bupleurum21_contig00038235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038235
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]   100   9e-20
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa...    92   3e-17
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p...    91   1e-16

>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
          Length = 201

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/65 (73%), Positives = 49/65 (75%)
 Frame = +1

Query: 37  VAYNF*PNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGNSRH 216
           VAYNF PNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDN        RFGDGGPT G    
Sbjct: 55  VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNLLFLLLFLRFGDGGPT-GRGSS 113

Query: 217 KQLDR 231
            + DR
Sbjct: 114 MRSDR 118


>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 510

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/60 (73%), Positives = 44/60 (73%)
 Frame = +1

Query: 28  TIAVAYNF*PNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGN 207
           T AVAYNF P GRP  LSEWGIPVGNNHGSSCGTTGP EDN        RFGDGG TV N
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPREDNLLFLLLLLRFGDGGHTVSN 416


>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 70

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/66 (72%), Positives = 48/66 (72%)
 Frame = +2

Query: 2   GAEVVNLSAP*QWHTTFDLTAGPVTFRNGGSPLATTTVVVAELLXXXXXXXXXXXXXXAS 181
           GA VVNLSAP QWHTT DL AGPVTFRNGGSPLATTTVVVAELL              AS
Sbjct: 5   GASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSSFFAS 64

Query: 182 GTEVLR 199
           GTEVLR
Sbjct: 65  GTEVLR 70


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