BLASTX nr result

ID: Bupleurum21_contig00038230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038230
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45184.2| Beta transducin-like protein, putative [Solanum b...    90   2e-16
ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...    90   2e-16
ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]                     83   3e-14

>gb|AAP45184.2| Beta transducin-like protein, putative [Solanum bulbocastanum]
          Length = 610

 Score = 89.7 bits (221), Expect(2) = 2e-16
 Identities = 47/86 (54%), Positives = 53/86 (61%)
 Frame = -2

Query: 289 VAFSKHIFQIYTYNSAGEIRLYLVVKSLLHGIDFICIRYISSSVYPL*IDAHIGCVNDIA 110
           VAFSKHI QIYTY+ AGE+R +L                         IDAH G VNDIA
Sbjct: 424 VAFSKHIVQIYTYSPAGELRQHLE------------------------IDAHAGGVNDIA 459

Query: 109 IDHPNKKLCVVTCGDDKTIKAWDALA 32
             HPNK+LCVVTCGDDKTIK WDA++
Sbjct: 460 FSHPNKQLCVVTCGDDKTIKVWDAVS 485



 Score = 20.8 bits (42), Expect(2) = 2e-16
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -3

Query: 33  LSGQRQYIFEG 1
           +SG+RQ++FEG
Sbjct: 484 VSGRRQHMFEG 494


>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
           gi|297737353|emb|CBI26554.3| unnamed protein product
           [Vitis vinifera]
          Length = 1135

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/84 (54%), Positives = 51/84 (60%)
 Frame = -2

Query: 289 VAFSKHIFQIYTYNSAGEIRLYLVVKSLLHGIDFICIRYISSSVYPL*IDAHIGCVNDIA 110
           VAFSKHI QIYTYN  GE+R +L                         IDAHIG VND+A
Sbjct: 424 VAFSKHIVQIYTYNPTGELRQHLE------------------------IDAHIGGVNDVA 459

Query: 109 IDHPNKKLCVVTCGDDKTIKAWDA 38
             HPNK+LC+VTCGDDKTIK WDA
Sbjct: 460 FAHPNKQLCIVTCGDDKTIKVWDA 483


>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
           gi|223540775|gb|EEF42335.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1137

 Score = 86.7 bits (213), Expect(2) = 1e-15
 Identities = 44/86 (51%), Positives = 51/86 (59%)
 Frame = -2

Query: 289 VAFSKHIFQIYTYNSAGEIRLYLVVKSLLHGIDFICIRYISSSVYPL*IDAHIGCVNDIA 110
           VAFSKHI Q+Y YN  GE+R +L                         IDAH+G VNDIA
Sbjct: 426 VAFSKHIVQLYAYNPTGELRQHLE------------------------IDAHVGGVNDIA 461

Query: 109 IDHPNKKLCVVTCGDDKTIKAWDALA 32
             HPNK+LC+VTCGDDK IK WDA+A
Sbjct: 462 FAHPNKQLCIVTCGDDKMIKVWDAVA 487



 Score = 20.8 bits (42), Expect(2) = 1e-15
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 33  LSGQRQYIFEG 1
           ++G+RQY FEG
Sbjct: 486 VAGRRQYTFEG 496


>ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|222839220|gb|EEE77571.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score = 85.5 bits (210), Expect(2) = 2e-15
 Identities = 45/84 (53%), Positives = 49/84 (58%)
 Frame = -2

Query: 289 VAFSKHIFQIYTYNSAGEIRLYLVVKSLLHGIDFICIRYISSSVYPL*IDAHIGCVNDIA 110
           VAFSKHI QIYTYN  GE R +L                         IDAH+G VNDIA
Sbjct: 426 VAFSKHIVQIYTYNPTGEPRQHLE------------------------IDAHVGGVNDIA 461

Query: 109 IDHPNKKLCVVTCGDDKTIKAWDA 38
             HPNK+LC+VTCGDDK IK WDA
Sbjct: 462 FAHPNKQLCIVTCGDDKMIKVWDA 485



 Score = 21.2 bits (43), Expect(2) = 2e-15
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 30  SGQRQYIFEG 1
           +G RQYIFEG
Sbjct: 487 AGGRQYIFEG 496


>gb|AAN62336.1|AF506028_3 CTV.2 [Citrus trifoliata]
          Length = 1127

 Score = 82.8 bits (203), Expect(2) = 3e-14
 Identities = 41/84 (48%), Positives = 50/84 (59%)
 Frame = -2

Query: 289 VAFSKHIFQIYTYNSAGEIRLYLVVKSLLHGIDFICIRYISSSVYPL*IDAHIGCVNDIA 110
           VA+S+HI QIY+Y+   E+R +L                         IDAH+G VNDIA
Sbjct: 425 VAYSRHIVQIYSYHGGDEVRQHLE------------------------IDAHVGGVNDIA 460

Query: 109 IDHPNKKLCVVTCGDDKTIKAWDA 38
             HPNK+LCV+TCGDDKTIK WDA
Sbjct: 461 FSHPNKQLCVITCGDDKTIKVWDA 484



 Score = 20.4 bits (41), Expect(2) = 3e-14
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 30  SGQRQYIFEG 1
           +G +QYIFEG
Sbjct: 486 NGAKQYIFEG 495


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