BLASTX nr result

ID: Bupleurum21_contig00038229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038229
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japo...   126   2e-27
gb|ABA98502.1| transposon protein, putative, Mutator sub-class [...   123   1e-26
gb|AAP53948.1| transposon protein, putative, Mutator sub-class [...   119   3e-25
gb|EAY99133.1| hypothetical protein OsI_21092 [Oryza sativa Indi...   119   3e-25
gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japo...   115   3e-24

>gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japonica Group]
          Length = 783

 Score =  126 bits (316), Expect = 2e-27
 Identities = 70/165 (42%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
 Frame = +3

Query: 3   KGKCKGELLSVVGRDANNQMFPICWAVVEGENTSS*SWFIEHMKMDLGEDGVCSTCVGWT 182
           KG   GELL  +GRDANNQM+PI WA+VE E   S  WF   +  DL    V     GW 
Sbjct: 466 KGSTNGELLCALGRDANNQMYPIAWAIVEKETNDSWDWFCALLFKDL----VAGDGDGWV 521

Query: 183 IISDQQKGLLQAVNILLPDAENRNCARHIYANFSKKFKG-----ALYGLLNRLMKNVPKV 347
           +ISDQQKG++ AV   +P AE+RNCARHIYAN+ KKFK        + +L  + + V   
Sbjct: 522 VISDQQKGIINAVETWIPKAEHRNCARHIYANWRKKFKNREWQKKFWSMLEAIRRKVMVR 581

Query: 348 LQNQN-------DPLCPNIRKKLEECKAQYRFWSIRHNLQKKYEI 461
           +            P+CPNI KKL     +Y F     N   K+E+
Sbjct: 582 IHEHRTKMEKWIGPICPNILKKLNAYVTEYGFCHAISNGNDKFEV 626


>gb|ABA98502.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 760

 Score =  123 bits (309), Expect = 1e-26
 Identities = 70/171 (40%), Positives = 89/171 (52%), Gaps = 18/171 (10%)
 Frame = +3

Query: 3   KGKCKGELLSVVGRDANNQMFPICWAVVEGENTSS*SWFIEHMKMDLGEDGVCSTCVGWT 182
           KG   GELL  +GRDANNQM+PI WA+VE E   S  WF   +  DL    V     GW 
Sbjct: 437 KGSTNGELLCALGRDANNQMYPIAWAIVEKETNDSWDWFCALLFKDL----VAGDGDGWV 492

Query: 183 IISDQQKGLLQAVNILLPDAENRNCARHIYANFSKKFKG-----------ALYGLLNRLM 329
           +ISDQQKG++ AV   +P AE+RNCARHIYAN+ KKFK             +  +L  + 
Sbjct: 493 VISDQQKGIINAVETWIPKAEHRNCARHIYANWRKKFKNREWQKKFWRFLPIISMLEAIR 552

Query: 330 KNVPKVLQNQN-------DPLCPNIRKKLEECKAQYRFWSIRHNLQKKYEI 461
           + V   +            P+CPNI KKL     +Y F     N   K+E+
Sbjct: 553 RKVMVRIHEHRTKMEKWIGPICPNILKKLNAYVTEYGFCHAISNGNDKFEV 603


>gb|AAP53948.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 1005

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%)
 Frame = +3

Query: 3   KGKCKGELLSVVGRDANNQMFPICWAVVEGENTSS*SWFIEHMKMDLGEDGVCSTCVGWT 182
           KG  KGELLS +GRDANNQ++PI WAVVE EN  S +WF+ H++ D+    +     GW 
Sbjct: 489 KGPLKGELLSAIGRDANNQLYPIAWAVVEYENKDSWNWFLGHLQKDI---NIPVGAAGWV 545

Query: 183 IISDQQKGLLQAVNILLPDAENRNCARHIYANFSKKFKGALYGLLNRLMKNVPKVLQNQN 362
            I+DQQKGLL  V+ L P AE+R CARHIYAN+ KK +      L    K   K+ +  N
Sbjct: 546 FITDQQKGLLSIVSTLFPFAEHRMCARHIYANWRKKHR------LQEYQKRFWKIAKAPN 599

Query: 363 DPLCPNIRKKL 395
           + L  + ++KL
Sbjct: 600 EQLFNHYKRKL 610


>gb|EAY99133.1| hypothetical protein OsI_21092 [Oryza sativa Indica Group]
          Length = 1005

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%)
 Frame = +3

Query: 3   KGKCKGELLSVVGRDANNQMFPICWAVVEGENTSS*SWFIEHMKMDLGEDGVCSTCVGWT 182
           KG  KGELLS +GRDANNQ++PI WAVVE EN  S +WF+ H++ D+    +     GW 
Sbjct: 489 KGPLKGELLSAIGRDANNQLYPIAWAVVEYENKDSWNWFLGHLQKDI---NIPVGAAGWV 545

Query: 183 IISDQQKGLLQAVNILLPDAENRNCARHIYANFSKKFKGALYGLLNRLMKNVPKVLQNQN 362
            I+DQQKGLL  V+ L P AE+R CARHIYAN+ KK +      L    K   K+ +  N
Sbjct: 546 FITDQQKGLLSIVSTLFPFAEHRMCARHIYANWRKKHR------LQEYQKRFWKIAKAPN 599

Query: 363 DPLCPNIRKKL 395
           + L  + ++KL
Sbjct: 600 EQLFNHYKRKL 610


>gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japonica Group]
          Length = 974

 Score =  115 bits (289), Expect = 3e-24
 Identities = 64/135 (47%), Positives = 82/135 (60%), Gaps = 4/135 (2%)
 Frame = +3

Query: 3   KGKCKGELLSVVGRDANNQMFPICWAVVEGENTSS*SWFIEHMKMDL----GEDGVCSTC 170
           KG  KGELLS VGRDANNQ++PI WAVVE EN SS +WF+ H++ DL    G D      
Sbjct: 387 KGVVKGELLSAVGRDANNQIYPIAWAVVEYENASSWNWFLGHLQKDLNIPYGGD------ 440

Query: 171 VGWTIISDQQKGLLQAVNILLPDAENRNCARHIYANFSKKFKGALYGLLNRLMKNVPKVL 350
            GW  ++DQQKGLL  +  L P AE+R CARHIYAN+ K+ +      L    K   K+ 
Sbjct: 441 -GWVFLTDQQKGLLSVIEHLFPKAEHRMCARHIYANWRKRHR------LQEYQKRFWKIA 493

Query: 351 QNQNDPLCPNIRKKL 395
           ++ N  L  + + KL
Sbjct: 494 RSSNAVLFNHYKSKL 508


Top