BLASTX nr result

ID: Bupleurum21_contig00038204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038204
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83532.1| hypothetical protein VITISV_014042 [Vitis vinifera]    75   6e-12
ref|XP_002317063.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002526975.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|XP_004134882.1| PREDICTED: uncharacterized protein LOC101206...    63   2e-08

>emb|CAN83532.1| hypothetical protein VITISV_014042 [Vitis vinifera]
          Length = 283

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
 Frame = -2

Query: 290 LEPYGRSSSGRFSKDSKITTLPGKN-QSDLSTDFEENELGKFSSRASNE---DSYTQTSV 123
           +EP G+S SG+ SK  + T+      +SDL+ D +E +    +S  ++E   D YT +  
Sbjct: 80  VEPSGQSLSGKKSKLPRKTSFAFPIIKSDLNVDLDEGDDTVETSLTAHETDVDCYTYSDT 139

Query: 122 ASPTAERSYSLNFERTKLSKIPLPQSAAAFYNGYSPQLEV 3
           A PT ERSYS+N  ++ LSKIPLPQSAA+FY G SP +EV
Sbjct: 140 ARPTIERSYSVNKRKSSLSKIPLPQSAASFYIGDSPLMEV 179


>ref|XP_002317063.1| predicted protein [Populus trichocarpa] gi|222860128|gb|EEE97675.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = -2

Query: 290 LEPYGRSSSGRFSKDSKITTLPGKN-QSDLSTDFE-ENELGKFSSRAS---NEDSYTQTS 126
           LEP+ +++ G  SK  + T+   ++ QSD+S D +  N L K SS  +    E+      
Sbjct: 111 LEPFEQTTFGTLSKVPRSTSFESQSSQSDMSFDLDGSNHLVKQSSPGTFETTEEHQVVPF 170

Query: 125 VASPTAERSYSLNFERTKLSKIPLPQSAAAFYNGYSPQLEV 3
           +  P  E+S+ LN  ++ LS IPLPQSAA FYNG+SPQ E+
Sbjct: 171 LPRPVIEKSFVLNKRKSNLSNIPLPQSAATFYNGFSPQFEI 211


>ref|XP_002526975.1| conserved hypothetical protein [Ricinus communis]
           gi|223533666|gb|EEF35402.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = -2

Query: 290 LEPYGRSSSGRFSKDSKITTLPGKNQSDLSTDFEEN--ELGKFSSRASNEDSYTQTSVAS 117
           L P  +S+SGR SK S  +      QSD S +  ++  +  K SS  ++E +     VAS
Sbjct: 89  LNPIRQSASGRLSKISSSSFAFSSFQSDTSFELGDDAYDSTKESSPKTSEAAEECQIVAS 148

Query: 116 ---PTAERSYSLNFERTKLSKIPLPQSAAAFYNGYSPQLEV 3
              P  E+ +S+   +  LSK+PLPQSAA+FYNG+SPQ+E+
Sbjct: 149 QTRPVTEKCFSMIHSKQNLSKVPLPQSAASFYNGFSPQVEI 189


>ref|XP_004134882.1| PREDICTED: uncharacterized protein LOC101206974 [Cucumis sativus]
           gi|449529443|ref|XP_004171709.1| PREDICTED:
           uncharacterized protein LOC101231856 [Cucumis sativus]
          Length = 576

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
 Frame = -2

Query: 287 EPYGRSSSGRFSKDSKITTLPGKN-QSDLSTDFEENELGKFSSRASNEDSY-TQTSVASP 114
           EP+ RSSSGR+ K  K +  P +   S+L+ D E+ + G           Y T  +   P
Sbjct: 73  EPFERSSSGRWLKGGKTSPFPFRTILSNLNLDLEDLDNGTKKRELGTFQEYQTLANPVRP 132

Query: 113 TAERSYSLNFERTKLSKIPLPQSAAAFYNGYSPQLEV 3
             E+S+S+   +   S I LPQSAA+FYNG+SP +EV
Sbjct: 133 WIEKSFSVKKRKDDFSGISLPQSAASFYNGWSPVMEV 169


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