BLASTX nr result

ID: Bupleurum21_contig00038202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038202
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518806.1| PREDICTED: probable indole-3-acetic acid-ami...   317   1e-84
pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid...   314   5e-84
ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-ami...   314   5e-84
ref|XP_002300248.1| GH3 family protein [Populus trichocarpa] gi|...   312   2e-83
ref|XP_002527466.1| Indole-3-acetic acid-amido synthetase GH3.3,...   312   2e-83

>ref|XP_003518806.1| PREDICTED: probable indole-3-acetic acid-amido synthetase
           GH3.1-like [Glycine max]
          Length = 595

 Score =  317 bits (811), Expect = 1e-84
 Identities = 149/182 (81%), Positives = 167/182 (91%)
 Frame = -3

Query: 547 LDKGKGLYFLFVKSETKTPGGLLARPVLTSYYNSDHFKTRPYDPYNVMTSPNEAILCVDS 368
           LDKGKGLYFLFVKSET+TPGGLLARPVLTSYY SDHFKTRPYDPYNV TSPNEAILC DS
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCSDS 205

Query: 367 FQTMYSQMLCGLYERQQVLRLGAVFASGLLRAIRFRQLNWPELANDIQTGSLSRKITNPE 188
           FQ+MY+QMLCGL ER  VLRLGAVFASGLLRAIRF QLNWPELA+DIQTG+L+ +IT+P 
Sbjct: 206 FQSMYTQMLCGLIERHHVLRLGAVFASGLLRAIRFLQLNWPELAHDIQTGTLNSRITDPA 265

Query: 187 IRACMSKVLRPDPELAEFISKECCEQNWEGIVTKIWPNTKYLDVIVTGAMAQYIPTLKYY 8
           IR+ M KVL+ DPELA+F++++C + NWEGI+T+IWPNTKYLDVIVTGAMAQYIPTL YY
Sbjct: 266 IRSYMDKVLKSDPELAQFVTQQCSKDNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLNYY 325

Query: 7   SG 2
           SG
Sbjct: 326 SG 327


>pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido
           Synthase From Vitis Vinifera Involved In Auxin
           Homeostasis gi|430800812|pdb|4B2G|B Chain B, Crystal
           Structure Of An Indole-3-acetic Acid Amido Synthase From
           Vitis Vinifera Involved In Auxin Homeostasis
          Length = 609

 Score =  314 bits (805), Expect = 5e-84
 Identities = 146/182 (80%), Positives = 167/182 (91%)
 Frame = -3

Query: 547 LDKGKGLYFLFVKSETKTPGGLLARPVLTSYYNSDHFKTRPYDPYNVMTSPNEAILCVDS 368
           LDKGKGLYFLFVKSET+TPGGLLARPVLTSYY S+HFKTRPYDPYNV TSPNEAILC DS
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 367 FQTMYSQMLCGLYERQQVLRLGAVFASGLLRAIRFRQLNWPELANDIQTGSLSRKITNPE 188
           FQ+MY+QMLCG+YER+QVLRLGAVFASGLLRAIRF QLNW +L +DI+TG+LS KIT+P 
Sbjct: 206 FQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTGTLSPKITDPS 265

Query: 187 IRACMSKVLRPDPELAEFISKECCEQNWEGIVTKIWPNTKYLDVIVTGAMAQYIPTLKYY 8
           +R C++ VL+PDPELA+ ++ EC + NWEGI+T+IWPNTKYLDVIVTGAMAQYIPTL YY
Sbjct: 266 VRNCVAGVLKPDPELADLVAGECSKDNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYY 325

Query: 7   SG 2
           SG
Sbjct: 326 SG 327


>ref|XP_002271252.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 598

 Score =  314 bits (805), Expect = 5e-84
 Identities = 146/182 (80%), Positives = 167/182 (91%)
 Frame = -3

Query: 547 LDKGKGLYFLFVKSETKTPGGLLARPVLTSYYNSDHFKTRPYDPYNVMTSPNEAILCVDS 368
           LDKGKGLYFLFVKSET+TPGGLLARPVLTSYY S+HFKTRPYDPYNV TSPNEAILC DS
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSEHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 367 FQTMYSQMLCGLYERQQVLRLGAVFASGLLRAIRFRQLNWPELANDIQTGSLSRKITNPE 188
           FQ+MY+QMLCG+YER+QVLRLGAVFASGLLRAIRF QLNW +L +DI+TG+LS KIT+P 
Sbjct: 206 FQSMYTQMLCGIYERKQVLRLGAVFASGLLRAIRFLQLNWHQLTHDIRTGTLSPKITDPS 265

Query: 187 IRACMSKVLRPDPELAEFISKECCEQNWEGIVTKIWPNTKYLDVIVTGAMAQYIPTLKYY 8
           +R C++ VL+PDPELA+ ++ EC + NWEGI+T+IWPNTKYLDVIVTGAMAQYIPTL YY
Sbjct: 266 VRNCVAGVLKPDPELADLVAGECSKDNWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYY 325

Query: 7   SG 2
           SG
Sbjct: 326 SG 327


>ref|XP_002300248.1| GH3 family protein [Populus trichocarpa]
           gi|222847506|gb|EEE85053.1| GH3 family protein [Populus
           trichocarpa]
          Length = 596

 Score =  312 bits (800), Expect = 2e-83
 Identities = 144/182 (79%), Positives = 168/182 (92%)
 Frame = -3

Query: 547 LDKGKGLYFLFVKSETKTPGGLLARPVLTSYYNSDHFKTRPYDPYNVMTSPNEAILCVDS 368
           LDKGKGLYFLFVKSET+TPGGLLARPVLTSYY SDHFKTRPYDPYNV TSPNEAILC DS
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNEAILCADS 205

Query: 367 FQTMYSQMLCGLYERQQVLRLGAVFASGLLRAIRFRQLNWPELANDIQTGSLSRKITNPE 188
           FQ+MY+QMLCGL ER+QVLR+GAVFASGLLRAIRF QL+W ELA+DI++G L+++IT+P 
Sbjct: 206 FQSMYTQMLCGLLEREQVLRVGAVFASGLLRAIRFLQLHWRELADDIESGMLNKEITDPS 265

Query: 187 IRACMSKVLRPDPELAEFISKECCEQNWEGIVTKIWPNTKYLDVIVTGAMAQYIPTLKYY 8
           ++ CM K+L+P+P+LAEF+  EC ++NWEGI+T+IWPNTKYLDVIVTGAMAQYIPTL YY
Sbjct: 266 VKDCMVKILKPNPKLAEFVRMECSKENWEGIITRIWPNTKYLDVIVTGAMAQYIPTLDYY 325

Query: 7   SG 2
           SG
Sbjct: 326 SG 327


>ref|XP_002527466.1| Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus
           communis] gi|223533106|gb|EEF34864.1| Indole-3-acetic
           acid-amido synthetase GH3.3, putative [Ricinus communis]
          Length = 597

 Score =  312 bits (799), Expect = 2e-83
 Identities = 146/182 (80%), Positives = 165/182 (90%)
 Frame = -3

Query: 547 LDKGKGLYFLFVKSETKTPGGLLARPVLTSYYNSDHFKTRPYDPYNVMTSPNEAILCVDS 368
           LDKGKGLYFLFVKSET+TPGGLLARPVLTSYY SDHFKTRPYDPYNV TSPNE+ILC DS
Sbjct: 146 LDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSDHFKTRPYDPYNVYTSPNESILCPDS 205

Query: 367 FQTMYSQMLCGLYERQQVLRLGAVFASGLLRAIRFRQLNWPELANDIQTGSLSRKITNPE 188
           FQ+MYSQMLCGL ER QVLR+GAVFASGLLRAI F QLNW ELA DI +G+L++++T+P 
Sbjct: 206 FQSMYSQMLCGLLERHQVLRVGAVFASGLLRAISFLQLNWQELARDIMSGTLNKRVTDPS 265

Query: 187 IRACMSKVLRPDPELAEFISKECCEQNWEGIVTKIWPNTKYLDVIVTGAMAQYIPTLKYY 8
           IR C++KVL+P PELAEFI  EC ++NWEGI+T+IWPNTKYLDVIVTGAM+QYIPTL YY
Sbjct: 266 IRDCIAKVLKPSPELAEFIRVECSKENWEGIITRIWPNTKYLDVIVTGAMSQYIPTLDYY 325

Query: 7   SG 2
           SG
Sbjct: 326 SG 327


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