BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038201
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...    59   5e-07
emb|CBI26162.3| unnamed protein product [Vitis vinifera]               56   4e-06
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
 Frame = +2

Query: 56  EYGVYEGALNVFDGLLERVNCP----WNLAWNAVIGVGSCEVVYKVYGDTMNCGVAPN-- 217
           E G+ E   +VF  L +    P    +N+   A + VG  ++V+K+Y   +  GV  N  
Sbjct: 141 ENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNID 200

Query: 218 VETFTCLILAFCVVDKLSESYDLL*QCLKDEMCXXXXXXXNS*VGFVSNGIILVCQQ--- 388
           VET  CLI AFC  +K+   Y+LL Q L+  +C       N+    + NG    C+Q   
Sbjct: 201 VETVGCLIKAFCAENKVFNGYELLRQVLEKGLC-----VDNTVFNALINGF---CKQKQY 252

Query: 389 ---SSML*L*MFVVRI*ISIVTIHWLCQ---KNNWEEEGYRIFGDLKDRGNAP 529
              S +L + M  ++   SI T   +     K    +E +R+F DLKDRG  P
Sbjct: 253 DRVSEILHI-MIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFP 304


>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
 Frame = +2

Query: 47  CFLEYGVYEGALNVFDGLLERVNCPWNLAWNAV----IGVGSCEVVYKVYGDTMNCGVAP 214
           C  + G+ E A++VF  L     C     WN+V    +  G  + V+++YG+ +   V  
Sbjct: 201 CLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVA 260

Query: 215 NVETFTCLILAFCVVDKLSESYDLL*QCLKDEMCXXXXXXXNS*VGFVSNGIILVCQQSS 394
           +V T   L+ AFC  +++S+ ++LL + L+D +            GF  +       + S
Sbjct: 261 DVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKD---KAYGRVS 317

Query: 395 ML*L*MFVVRI*ISIVT----IHWLCQKNNWEEEGYRIFGDLKDRGNAP 529
            L   M        I T    ++ LC K     EG+R+F DLKDRG AP
Sbjct: 318 DLLHSMIARNRAPDIFTYQEVVNGLC-KGGKGPEGFRVFKDLKDRGYAP 365


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
 Frame = +2

Query: 47  CFLEYGVYEGALNVFDGLLERVNCP----WNLAWNAVIGVGSCEVVYKVYGDTMNCGVAP 214
           C  E G+ E A+  FD L E    P    WN A+ + +  G  ++++K+Y   M  GV  
Sbjct: 200 CVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQK 259

Query: 215 NV--ETFTCLILAFCVVDKLSESYDLL*QCLKDEMCXXXXXXXNS*VGFVSNGIILVCQQ 388
           +V  ET   LI AFC  +K+S +Y++L Q L+D +            GF        C++
Sbjct: 260 DVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGF--------CKE 311

Query: 389 SS-----ML*L*MFVVRI*ISIVT----IHWLCQKNNWEEEGYRIFGDLKDRGNAP 529
            +      L   M V      I T    I+  C KN    + + +F  LKDRG AP
Sbjct: 312 KNHHRVLELVHTMIVKNRNPDIFTYQEIINGFC-KNWMTLQAFEVFNALKDRGYAP 366


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
 Frame = +2

Query: 47  CFLEYGVYEGALNVFDGLLERVNCP----WNLAWNAVIGVGSCEVVYKVYGDTMNCGVAP 214
           C  E G+ E A+  FD L E    P    WN A+ + +  G  ++++K+Y   M  GV  
Sbjct: 164 CVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQK 223

Query: 215 NV--ETFTCLILAFCVVDKLSESYDLL*QCLKDEMCXXXXXXXNS*VGFVSNGIILVCQQ 388
           +V  ET   LI AFC  +K+S +Y++L Q L+D +            GF        C++
Sbjct: 224 DVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGF--------CKE 275

Query: 389 SS-----ML*L*MFVVRI*ISIVT----IHWLCQKNNWEEEGYRIFGDLKDRGNAP 529
            +      L   M V      I T    I+  C KN    + + +F  LKDRG AP
Sbjct: 276 KNHHRVLELVHTMIVKNRNPDIFTYQEIINGFC-KNWMTLQAFEVFNALKDRGYAP 330