BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038179
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...   163   2e-38
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score =  163 bits (412), Expect = 2e-38
 Identities = 89/171 (52%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
 Frame = +3

Query: 57  SSLHYSTSPGSVTG---KRGVD----LYRRISPIGDWNISIEPILDQWIEEGKTVALPDX 215
           SSL YST+P S      +RG D    LYRRISP+GD  +SI PILDQWIEEGK+V     
Sbjct: 25  SSLFYSTTPTSSQKWFRERGKDNLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQL 84

Query: 216 XXXXXXXXXXXXHKHALQVSRWMSDKMYLQLSRADMAVRLKLISKAEGIDQAVMYFSNIP 395
                       + HAL++S WMSDK Y  L+  D+A+RL L+SK  GI+QA  YF N+P
Sbjct: 85  QVFIKELRYCKRYTHALEISMWMSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVP 144

Query: 396 AGMKGLEAYGCLLNCYAEEKDVEKAEEIMQKMRDLGLPIHTISYNNMLNLY 548
             +K LE Y  LLNCYA  K V+KAE +MQ MRDLG    T++YN MLNL+
Sbjct: 145 QKLKVLEVYNALLNCYAYAKSVDKAEAVMQNMRDLGFAGKTLTYNVMLNLH 195


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/146 (45%), Positives = 95/146 (65%)
 Frame = +3

Query: 111 DLYRRISPIGDWNISIEPILDQWIEEGKTVALPDXXXXXXXXXXXXXHKHALQVSRWMSD 290
           +LYRRISP+GD NIS+ P+LDQW+ EG+ V   +              KHAL++S+WMSD
Sbjct: 30  NLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSD 89

Query: 291 KMYLQLSRADMAVRLKLISKAEGIDQAVMYFSNIPAGMKGLEAYGCLLNCYAEEKDVEKA 470
           K Y  LS AD+A+R+ LI +  G++Q   YF N+P+ +K  + +  LLNCYA EK V+KA
Sbjct: 90  KRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKA 149

Query: 471 EEIMQKMRDLGLPIHTISYNNMLNLY 548
              MQK++++G     + YN M+NLY
Sbjct: 150 NAFMQKIKEMGFANSPLPYNIMMNLY 175


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/146 (45%), Positives = 95/146 (65%)
 Frame = +3

Query: 111 DLYRRISPIGDWNISIEPILDQWIEEGKTVALPDXXXXXXXXXXXXXHKHALQVSRWMSD 290
           +LYRRISP+GD NIS+ P+LDQW+ EG+ V   +              KHAL++S+WMSD
Sbjct: 30  NLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSD 89

Query: 291 KMYLQLSRADMAVRLKLISKAEGIDQAVMYFSNIPAGMKGLEAYGCLLNCYAEEKDVEKA 470
           K Y  LS AD+A+R+ LI +  G++Q   YF N+P+ +K  + +  LLNCYA EK V+KA
Sbjct: 90  KRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKA 149

Query: 471 EEIMQKMRDLGLPIHTISYNNMLNLY 548
              MQK++++G     + YN M+NLY
Sbjct: 150 NAFMQKIKEMGFANSPLPYNIMMNLY 175


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/145 (49%), Positives = 95/145 (65%)
 Frame = +3

Query: 114 LYRRISPIGDWNISIEPILDQWIEEGKTVALPDXXXXXXXXXXXXXHKHALQVSRWMSDK 293
           L RR+S I D N+S+ P+LD+WI+EG+T+                 + HAL++S WM+DK
Sbjct: 48  LSRRLSRIRDHNVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDK 107

Query: 294 MYLQLSRADMAVRLKLISKAEGIDQAVMYFSNIPAGMKGLEAYGCLLNCYAEEKDVEKAE 473
            YL L+   +AVRL LISK  GI+Q   YF+NIP  +KGLE+YG LLNCYA  K VEKAE
Sbjct: 108 RYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSVEKAE 167

Query: 474 EIMQKMRDLGLPIHTISYNNMLNLY 548
            +MQ+MR+LG     + +  MLNLY
Sbjct: 168 AVMQRMRELGFARKPLVFTVMLNLY 192


>ref|XP_002330624.1| predicted protein [Populus trichocarpa] gi|222872228|gb|EEF09359.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  139 bits (350), Expect = 3e-31
 Identities = 71/165 (43%), Positives = 104/165 (63%)
 Frame = +3

Query: 54  LSSLHYSTSPGSVTGKRGVDLYRRISPIGDWNISIEPILDQWIEEGKTVALPDXXXXXXX 233
           L +L +ST   +++      L RRIS + D  + + P++++W++EG+ V   D       
Sbjct: 19  LRALCFSTDTTAISHS----LNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRK 74

Query: 234 XXXXXXHKHALQVSRWMSDKMYLQLSRADMAVRLKLISKAEGIDQAVMYFSNIPAGMKGL 413
                   HALQ+S+WMSD+    LS  D+AVRL LISK  G++QAV YF+++P  ++GL
Sbjct: 75  LRKIHRFSHALQISQWMSDQRGHNLSPGDVAVRLDLISKVHGLEQAVTYFNSVPESLRGL 134

Query: 414 EAYGCLLNCYAEEKDVEKAEEIMQKMRDLGLPIHTISYNNMLNLY 548
           E YG LLNCYA  K +E+AE  M+KMR++G   + +SYN MLNLY
Sbjct: 135 EVYGALLNCYAHYKHLEEAEATMRKMREMGFVRNVLSYNVMLNLY 179